Corvus cornix (hooded crow): 104687189 Help Entry 104687189         CDS       T03546                                  Symbol POLQ Name (RefSeq) DNA polymerase theta   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism ccw  Corvus cornix (hooded crow) Brite KEGG Orthology (KO) [BR:ccw00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ccw03400]     104687189 (POLQ) Enzymes [BR:ccw01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      104687189 (POLQ) DNA repair and recombination proteins [BR:ccw03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     104687189 (POLQ) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 Helicase_dom4_arc Motif Other DBs NCBI-GeneID:  104687189 NCBI-ProteinID:  XP_039408112 LinkDB All DBs Position 1:21391139..21447280 Genome browser AA seq 2592 aa AA seqDB search MARREDGGGTTVAPSAAAAAAAEGIRGGSCRRAGRAVPPGPAAPRRAVLSPPPGLDLSLR GSGSAGQYQQVNVPEDQADKLLLASWGLPKAVLEKYHSLGVVQMFEWQAECLMLGQVLEG KNLVYSAPTSAGKTLVAELLILKRVLETRKKALLILPFVSVAKEKKCYLQTLFQEVDVRV EGYMGSMSPAGRFSALDVAVCTIEKANGLINRLIEENKMDSLGVVVVDELHMLGDSHRGY LLELLLTKVRYVTEKVAKRHTKSTSPGFGGIQIVGMSATLPNLGLLASWLDAELYCTDFR PVPLKEWVKIGSNIYDSSMNLVREFQPKLQLKGDEDHIVSLCYETVCGGHSVLLFCPSKN WCEKLADIIAREFYSLQQAESSTKNSALAPVVVDREGIDEVLDQLKRSISGLDSVLQRTL PWGVAFHHAGLTFDERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPTFGGRLL DILTYKQMAGRAGRKGVDTEGESILVCKPSERSKGAALLQGSLKPVCSCLLRREGEGVAS SMKRAILEIIVGGVANTPEDVQTYASCTLLASSLKESKWENGKGQDKAQAGPIEACVAWL LENEFIQVVDSGSDVKAKVYHPTHLGSATLSSSLSPTEAMEIFADLQRAMKSFVLENDLH IVYLVTPVYEEWTTIDWYQFFCLWEKLPASMKRVAELVGIEEGFLARSVRGKITAKTEKQ HRQMAIHKRFFTSLALLDLISEVPLQDMTKKYGCSRGQLQSLQQSAATYAGMITVFCNRL GWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQRARTLYSAGFVTVADLAKASPDDV AAALKSSVPFKSIRRAVDEDEESAEERRAVRSIWMAGMKGLTEGEAASVIVEEARRLLQQ DLALMGVQWNPESFLETDTSSVISSESELEDRLHRSDGEESAESSRVLNKKGCRVQHCNG LGSRIGDLSNIKKGYKRRLSSSTESSVFESEVPGRKQARAEEGKGDLIYRARKWPNVCRG NENTEEISLVKTKMDSRTAIPEHLTEQGKTPTLRTESSASRLINSTDTHLNQTRNKNTAS KLQGSLPEDSNKLSTDIQKLPVFHTSISTDNSVSNQNNKEFMETDSVTHKASNSVQMGEV KIGRKDKMEGLFTAPTTTNEGMPKGRAGFQAPAMLSMETHSIVGSRGTPGSARTQRTDNT DGEQNKMNKTQTDVSCAEVRIDRHFCPGEDKTCNIQIQNGGKNGSEKPNGILLQAGTLEK GSSHPKDFLKGSLVKSRGVCNAHDVQNDPASHLFSDSRDFEDSFQLDTQTEMIIKQEGAA GITGQQGIQGSELAAIPQQGIPKNLSSLWTENDTDKRLAATVRKRSFSSLITTNKITKNT TQHCSNKVLESEGLNLQPVVKKIEPAPCLKESDFSVTDSQLHSFLQDYQTQNSVKEESVS KDLNEATSHLGREHIVQAECQPVPETSLNMSDSLLFDDSFSNVNDLSAVHMMEADGKDPV ALLPPDGVLQSLRPVENKSDVNDNQMEHENPVQCNSVSQASSDVIAEVLGRGNSPSFLKD IPSSFQGQSGLRNPVICNNDPKPKDLVGDQGEKLQRSHQALEKKRHPVVWTDCSFELSPG LQDVLDKWPSLSGIEPVSASSSLKGELVAPIVSQEPVPVFESDCCEPEPLPACQDLKSSF KVKENKTENSDLRKTEGITLQLKGSNRTSCPAPDSNNGFIPPTPPKELFPKSSVSLPVKS ARKGQVTCKNEGQMVQAQWNSEGNAKQQVKTFQVHLGCLDPIDTDEIKDDSTIDQGFSLQ LSQDVFPFVPLSAESFTIVDVASNKALFQTFIAEWKEKSRFSISVACERTKCLLSPKSTI GGKFKKVSSPQWMQVKDDGFPVQGCEDILVVGLAVCWGGKDAYYISLQQIQDQTEISLSL APPPLDQSLSVAERLNHVQLYLQKKPRKERSLIMYDFIQHYKTLLMACGISLEGNFEDPK VACWLLDSGSKECTLHNMVTNFLPSELPLLEGVGTGQGVQSLGLSASGDHSGRYRAATES VLIFNVMDQLHKELQKENLTDVFSKVEMPTHYCLALLELNGIGFSTTAYETQKQVMQAKL SQIETKAYQLAGHSFSLTSPDDIAEVLFLELKLPQNGEVKLQGNKKTLGYTRRATAKGNR VRLSKQFSTTKDVLEKLKTLHPLPGLILEWRRINNAITKVVFPLQREKRLNSALGMERIY PISQTHTATGRVTFIEPNIQNVPRDFEIEMPTVVEESPPSQAHGNANSRAALGGRCTKHS SILPNGLKVQAANRSEERGMPFSVSMRHAFVPFPGGLILAADYSQLELRILAHLSCDCRL IQALNGGTDVFKSIAAEWKMMDPEAVGDRTRQQAKQICYGIIYGIGAKSLGEQMGIDENE AANYIESFKSRYTGVQKFLRETVRSCRRDGFVQTILGRRRYLPAIKDPNPYSKAHAERQA VNTTVQGSAADIVKTATVNIQRRLEAFSSVFKSHGHLESSFQRDKTGRLLRRRNAGMLHP IRGGFFILQLHDELLYEVAEDDVIQGEEDSILLVLLPHSLPTCLPGAGWQHGCSDREARD GKRHQTLGETEC NT seq 7779 nt NT seq  +upstreamnt  +downstreamnt atggcgcggcgggaagatggcggcggcaccaccgtcgcgccgagcgctgccgccgcggcc gcggctgaggggatccgcggcggcagctgccgcagggcggggcgggctgtgccgcccggc cccgccgctccccgccgcgctgtgctgagccccccgcccggcctcgacctctccctgcgc ggcagcggctcggcagggcaatatcagcaggtaaatgttcctgaagaccaagcagacaaa ttgctccttgcaagctggggtcttcccaaagcagttctggagaaataccacagtctggga gtggtgcagatgtttgaatggcaagcagaatgcctaatgcttggacaagttctggaaggg aagaacctagtttactcagctcctaccagtgctggaaagactcttgtcgcagaattgctt attttgaagcgagtcctggagactcgtaagaaagctcttctcatccttccctttgtctct gtggccaaggagaagaaatgttaccttcagaccctgtttcaggaggtggatgtgagagtt gaaggctacatgggaagcatgtctcctgcaggacgtttctctgctctggatgttgctgtc tgcaccattgagaaagccaatggactaatcaacaggctcatagaagaaaacaaaatggat tcactgggagtggtggttgtggatgagttgcacatgctgggagactctcatcgaggatat ctgctggaactcctcctgaccaaagtgagatatgttacagagaaggtagcaaagcgacac acgaagagcaccagtcctggttttggtgggatacaaatagtaggcatgagtgctaccctc cctaacttggggctcctggcctcatggttagatgcagagctgtactgtacagatttccgc cctgtgcccctcaaggagtgggtgaaaattggcagcaacatatatgactcctccatgaat ttagtgcgagaattccagcccaagctgcaactgaagggagacgaagaccatattgtgagc ctgtgttatgagactgtttgtggtggccattcagtcctgcttttctgtccatccaagaac tggtgtgagaagctggcagacatcattgccagggagttctacagtttgcaacaagctgag agttctacaaaaaactcagcccttgccccagttgttgtggacagagaagggattgatgag gttctggatcagttaaagcgttcaatctcaggcctggattctgtgctccagcgtactttg ccatggggagtggcatttcatcatgcaggtctgacttttgatgagcgggacatcattgag ggagcctttcggcagggcctgatccgagtcctggcagcgacctccacgctctcgtcggga gtgaacctgcccgcgcgccgcgtcattatccggacacccaccttcggtggcagactgctg gacatcctcacctacaagcagatggctggaagggctggcaggaaaggggtagacacagag ggcgagagcattttagtctgcaagccctcagaaagatcaaaaggtgctgctctgcttcag ggatctctcaagcctgtttgcagctgtttgcttagaagagaaggggaaggtgttgcttct agcatgaaaagagcaatacttgagatcatcgtggggggagtagccaacactccagaggat gtgcagacctatgcctcttgcactctgcttgcatccagcttgaaagaaagcaagtgggaa aatgggaaagggcaagacaaagcacaggctggacctatcgaggcttgtgtggcatggttg ctggaaaatgaattcattcaagttgtggactctggcagtgatgtgaaagcaaaggtttat catccaacacatcttggctcagctactctttcctcttctctttcaccaactgaagccatg gaaatctttgctgacctgcagcgagctatgaaaagctttgttctggagaatgatctgcat attgtctatttggtcaccccagtgtatgaggagtggaccacaattgattggtaccagttc ttctgcttatgggagaaacttcctgcctcaatgaaacgtgtggctgagctggtggggatt gaagaaggctttctagctcgctctgtaaggggcaaaatcacagctaaaacagagaaacag cacagacaaatggccatccacaaaaggtttttcaccagccttgcccttctggatttaatc agtgaggttcctttacaagatatgaccaagaaatacggctgtagtcgtggtcagcttcaa tccttgcagcaatctgctgccacttatgcaggaatgataacagttttctgtaatcgactg ggctggcacaacatggagctgttgctctctcagttccagagccgcctcacttttggggtt cacagggagctctgtgacctggtccgagtgtctctgctgaacgcacagcgtgccaggaca ctttacagcgctggctttgtcaccgtggctgaccttgctaaagccagtcctgatgatgtg gcagctgctctgaagagctcagtaccgtttaaaagcattcgtagggctgtggatgaggat gaagagtcagcagaggagcgtcgggccgtgcgcagcatctggatggctggaatgaagggc ttaactgaaggagaagcagcttctgtcattgtggaggaagccaggagacttctgcagcag gatttggcactgatgggagtgcagtggaacccagagtcttttctcgagactgatacatcc tctgtgatcagcagtgagtcagaactggaagacagactgcacagatcagatggagaggag tctgctgagtcttcaagggtattaaacaaaaaagggtgcagagttcaacactgtaatggc cttggttctcggattggagacttatcaaatattaaaaagggatataaaaggcgactgagc agtagcacagaaagctctgtatttgagagtgaagtcccaggcaggaaacaggctcgagca gaggaaggcaagggtgatcttatatacagggctagaaaatggccaaatgtctgcagaggc aatgaaaacacagaagaaatttctctggtcaaaaccaagatggattccaggacagcaatc ccagagcaccttactgaacaaggaaaaacaccaacattgagaacagagtcttcagcctct cgattgattaacagcacagatacgcatttaaaccagactaggaacaaaaataccgcttca aaactgcaggggtcacttcctgaagattcaaataagcttagcacagacatacaaaagctg cctgttttccacactagcatctctacggataattctgtttcaaaccaaaataataaggaa tttatggaaacagattctgtaactcataaagcctcaaattctgtacagatgggggaagtt aagattgggaggaaagataaaatggaaggattatttacagcgcctaccaccacaaatgaa ggcatgcctaaggggagagcaggttttcaggcacctgctatgctatctatggagacacac agtattgtcggaagtagaggaacacctggtagtgctaggacacagagaactgacaatact gatggtgagcagaacaaaatgaataaaactcaaacagatgtgagctgtgctgaggtgagg attgataggcatttttgccctggtgaggataaaacctgcaatattcagattcagaatggt ggcaaaaatgggagtgaaaagcccaatggaatattgttacaagctggaacactggagaaa ggcagcagtcatcctaaggactttctgaaagggtctttagtaaaatccagaggtgtttgc aatgcacatgatgttcagaatgatccagcttctcatctgttttctgactctagagacttt gaagacagcttccagttggatactcaaactgagatgataataaaacaggagggagcagct ggaatcacaggacagcagggaatacaaggttcagagctggcagcaataccacagcaggga ataccaaaaaacctaagcagtttatggactgagaatgatactgataaaaggctggctgca acagttaggaaacggagcttctcaagtcttatcaccaccaataaaattacaaaaaacaca actcagcactgtagtaataaagttttggagtctgaaggccttaatttacagcctgtcgtg aagaaaatagaacctgcaccttgccttaaagaaagcgatttctcagtcactgactcgcag ctgcacagttttctacaagattaccagacccaaaattcagtgaaagaggagagtgtgtct aaagacctgaatgaagcaacctcccatttaggtagggaacacattgtacaagcagaatgc cagcctgtccctgaaacaagcctaaatatgagtgatagcttgctgtttgatgatagcttc agtaatgtcaatgacctttcagctgttcacatgatggaagctgatggaaaggaccctgtg gctttgcttcctccagatggtgttttgcagagtctaaggcctgttgagaataaatctgat gtcaatgacaatcagatggaacatgagaatcctgtacagtgtaacagtgtgtctcaagca tcctcggatgtaatagcagaagttttaggccgtggaaactccccgtcttttctgaaagac attccttcttcatttcaaggtcagtcaggattaagaaacccagtgatttgtaacaatgac cccaaaccaaaggatttagtaggagatcaaggtgaaaagctccagagaagccaccaagct ttagagaagaaacgccatccagtagtgtggactgactgctcgtttgaactaagcccagga ttgcaggatgtattagacaaatggccgagcctctcaggcatcgaaccagtttcagcaagt tccagtttgaaaggagagttagttgctcctattgttagtcaagagccagttccagttttt gaatccgactgttgtgagccagagcctttgcccgcttgccaggatttaaaaagctctttc aaggttaaagaaaacaaaactgaaaactcagatcttcggaaaacagagggcataacactt cagctcaagggaagcaacagaacatcctgtcctgcaccagatagtaacaatgggtttatt cctccaacacctcccaaagagctttttccaaaaagttctgtttctctccctgtgaaatct gcaagaaaaggacaagtcacctgcaagaatgaagggcagatggttcaggcacagtggaat agtgagggcaatgcaaagcagcaggtaaaaacattccaggtccatcttgggtgtctagac ccaattgacactgatgagataaaagatgattccactatagaccaaggcttttcactgcag ctctctcaggatgtttttccatttgttcccttaagtgctgagagtttcactattgttgat gtagcaagcaacaaagcacttttccagacttttattgcagaatggaaggagaaaagcaga ttctccatctcagtggcatgtgaaagaacaaagtgccttttgtctcccaaatcaacgatt ggtggcaaattcaaaaaagtgagttctcctcagtggatgcaagttaaagatgacgggttt cctgtccaaggatgtgaagacatcttggtagttggactggcagtgtgttggggtggaaaa gatgcctattatatctctttgcagcagatacaagaccagactgaaatcagtctgagtttg gcaccaccacctttggaccaaagcctctctgtggcagagagactgaaccatgtgcagctg tacctgcagaagaagcccaggaaggagcgctcacttatcatgtatgacttcattcagcac tacaaaactctgctgatggcttgtggcatctccctggaaggaaattttgaggacccaaag gttgcatgttggctgctggattctggctccaaggaatgcacccttcacaacatggtgacc aactttctccccagtgagctgcccctcctggaaggagtgggcactggccaaggggtgcag agcctggggctgagtgccagtggagatcattctgggaggtacagagcagccacagagtct gtgcttatcttcaatgtcatggaccaactccataaggaattacagaaggaaaatctgaca gatgtattttctaaagtggagatgcccacccattattgcttggctctgctggagctgaat ggcattggtttcagcacaacagcctatgagacccagaaacaggtcatgcaggctaaactg agccagattgagaccaaagcatatcagctggcaggtcacagcttctccttgacgagccct gatgacattgcagaggtgttgttcctggagctgaagttgccacaaaatggagaagtgaaa ctccaagggaacaagaaaaccctgggttacaccagaagagcaactgctaaaggaaacagg gtcaggctaagcaagcagttcagtacaaccaaggatgttttggagaaattaaagacgctt cacccattgccagggctgatattggaatggaggaggatcaacaacgccattactaaagtg gtgtttccactacagagggagaagcgattgaattctgcactgggaatggaaaggatatat ccaatttcacagactcacacagctacaggtcgagtaaccttcatagagccaaatatccag aatgtgccaagagattttgagattgaaatgccgactgtggttgaagaaagcccaccctcc caagcccatggaaatgctaattctcgtgctgctttggggggcagatgcacaaagcattcc agtattttgcctaatgggctaaaggttcaagctgcaaacagatccgaagaaagaggaatg ccattttctgttagcatgaggcatgcttttgttcccttcccaggtggcttaatcttggct gctgattactctcagctggaactgaggatccttgctcatttgtcttgtgactgtcgcctc attcaagccttgaatggtggtactgatgtctttaagagcatcgcagcagaatggaaaatg atggatcctgaagctgttggagacaggaccaggcaacaagctaagcagatttgctatgga atcatctatggaataggagcaaaatctttaggcgagcagatggggattgatgaaaatgaa gctgccaattacattgagtccttcaaatcaagatacacaggggttcagaaattcttgagg gagacagtgcggagctgcagaagggatgggtttgtgcagaccatcctggggagacggcga tacctgccagctatcaaagatccaaatccctacagcaaagctcatgcagagcgacaggct gtgaatacaactgttcagggatctgctgcagatattgtcaaaacagccactgtgaatatt cagagacgcctggaagctttctcctctgtgttcaagtcccatggacatctggagagctcc ttccagagagataagaccggaaggctgttgaggaggagaaatgcagggatgttacatccc atcagaggaggcttctttattctccagctgcacgatgagctcctctatgaagttgcagag gacgatgtcatccagggagaggaggattctatccttttggtactgcttcctcattcccta cctacttgccttcctggtgctggttggcagcacggttgctcagatcgtgaagcacgagat ggaaaacgccatcaaactcttggtgaaactgaatgttaa

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