KEGG   Corvus cornix (hooded crow): 104687211
Entry
104687211         CDS       T03546                                 
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104687211 (WDR3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccw03009]
    104687211 (WDR3)
Ribosome biogenesis [BR:ccw03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104687211 (WDR3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Utp12 DSE1_N NBCH_WD40 Beta-prop_WDR75_1st ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_NOL10_N ASA1 Beta-prop_VPS8 CFAP251_N Beta-prop_WDR41 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st WDR54 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_SPT8 PAC11 B-prop_COPA_B_2nd Beta-prop_LRRK2 Utp21 Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 104687211
NCBI-ProteinID: XP_039415740
LinkDB
Position
1:26885770..26904988
AA seq 939 aa
MGLTRQYLRYEPAALFGLVASARAGVAFVALRGERGRYVAVPACEHVFVWDTRKGEKVLI
LKGLKQEVSYLCPSPDGLHLAVGYEDGAIRVFSLLSGESTITFNGHRAAVTALQYDHLGG
RLVSGSKDTEVIVWDVINESGLYRLRGHKDVITQVLFLKEKNLLVTCAKDTLVKWWDLDT
QHCFKTLVGHRAEVWGMALLSNEKRLITGSADSELRVWDLAYIQEVKDPDEPESKKSKGS
SSPGAEENTEEDETLELDEHPEERIVKCSKVGSIMREGRDRVVTLGTDRMGKFLACHGTD
AVLEVFSVLSEEEIQKKLEKKMKKARKKAKQNSEEEPERSVELSLQEEIQRVTNVKASSK
IKSFDLILSPKGELKMVLLLQNNVIELYNLDLSAQVPQAVRVSRITIGGHRSDVRTLAFS
SDNIAILSAAAESVKIWNRLTLQCIRTMECEYALCSLFVPGDRQVIVGTKTGKLQLYDLA
SGSLIETLDAHDGAVWSIALSPDQHGFVTGGADKCVKFWEFELVKDESNVQKRLSMKHVR
VLQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDICYDGT
LIATGSADRNVKIWGLDFGDCHRSLFAHEDSVMYLQFVPKSHLFFTAGKDSKIKQWDADK
FEHVQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLILEEEREMQREAEYE
ESVAKEEQPVVAGEKQGETGLAGRKTIETIKAAERIMEAIELYREEMAKLKEHNAICKAA
GKEVPFPVNPILRAYGNITPSAYVLEVFKKVRSSELEESLLVLPFSYVPDLLRLFNEYIQ
LGSDVELLCRALLFLLKIHFGQITSNQTLVTVIENLKKTTISRVSEARDVLGFNMAGLQF
LKREIEAKDEVTFFADATERFEEKKRKRKKKEKMVLALL
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgggcctgacgcggcagtacctgcgctacgagcccgccgcgctcttcgggctggtggcc
agcgccagggccggcgtggccttcgtggcgctgcgcggcgagcggggccgctacgtggcc
gtgccggcttgcgagcacgtgttcgtgtgggatacaaggaaaggagagaaggttcttatc
cttaagggtctcaagcaggaagtcagttacctctgcccctctccagatgggttgcacctg
gctgttgggtatgaagatggagcaatccgtgtcttcagcctcctaagtggagaatccact
atcactttcaatggacacagggctgcagttacagccctgcagtatgaccacctgggtggc
aggctggtgtctggctcaaaggatacagaagtcatcgtgtgggatgtcatcaatgagagt
ggcctgtaccggctgaggggacacaaggatgtcatcactcaagtccttttcttgaaggag
aagaacctgttggtcacctgtgccaaagacacactggtgaaatggtgggatctggacacc
cagcactgtttcaaaactctggttggacaccgagctgaggtctgggggatggctttgctg
tccaacgagaagcgtctgatcactgggagtgctgacagtgagctgcgggtgtgggatctt
gcatacatccaggaggtaaaagatcctgatgaaccagaatccaaaaaaagcaaagggtct
tcttcacctggagcagaagaaaacactgaagaggatgagaccttagagttggatgagcat
cctgaggaacgcatcgttaagtgcagcaaagttggatccatcatgcgggaagggagagac
cgggtggtgactcttggcacagaccggatgggcaagtttttggcttgccatggaacagat
gctgttctagaagtgttctctgtcctttctgaagaggaaatccaaaagaaattggaaaag
aaaatgaagaaagcaaggaaaaaagccaaacagaactctgaagaggagcctgaaaggagt
gtggagctgagcctgcaggaggagattcagcgggtcactaatgtcaaagcttcttctaaa
atcaagtcatttgacttgattctctctccaaaaggagagctgaagatggtgctgctgctc
cagaacaatgtcattgagttgtacaacctggacctgtcagcacaagtccctcaggctgtc
cgtgtgtccaggataaccattggaggccaccgcagtgatgtcaggacgttggcttttagc
tctgacaacattgccattctctcagcagctgcagagtctgtgaagatttggaacaggttg
accttgcagtgcatccggacgatggagtgtgagtatgcgctctgctcgctcttcgtcccc
ggagatcggcaggtcatcgttgggaccaagacagggaagctgcagctgtatgacctggct
tctggcagtctgatagagacacttgatgctcacgacggggcagtgtggtccattgctctt
tcaccagaccagcatggctttgtgacaggaggtgctgataaatgtgtcaagttctgggag
tttgagcttgtgaaggatgagagcaatgttcagaaaaggctttccatgaaacacgtgcgc
gttttacagctggatgaagacgtgctgtgtgtgcggtacagccccaaccagaagctgctg
gctgtctccttactggattgcacagtgaaggtgttctatgttgacacactcaagtttttc
ctctctttgtatggacacaagctgccagtgctgtgtatggacatctgctatgatgggact
ctaattgcgactgggtctgctgacaggaatgtgaagatttggggcttggattttggggac
tgtcaccgttctctctttgcccatgaagacagtgtgatgtatctgcagtttgtgcccaaa
tcccatctcttcttcacagctgggaaggacagcaagattaagcagtgggatgcagataaa
tttgaacatgtccagacactggaggggcatcaccaggaggtgtggtgcttggcactcagt
cccaatggagactatgtggtgtcagcatcccatgacaagtccctgcgcctctgggaaagg
acgagggagccacttattttggaagaggagagggagatgcaacgagaagctgaatatgaa
gagagtgtagcaaaggaagagcagcctgtggtggctggagagaagcaaggagagacaggg
ctggcaggaaggaagaccattgaaaccatcaaagcggctgagaggatcatggaagccatc
gagctgtacagagaagagatggcaaaactaaaggaacacaatgccatatgcaaagctgcc
ggaaaagaggttccctttcctgtcaatcccatcctccgtgcctatggaaatattacacct
tctgcgtacgtgctggaagttttcaagaaggtcaggtcgagtgagctggaagaatctctc
ctggtgctgcccttctcctatgtccctgatctgctcagactcttcaatgaatatattcag
ctgggctcagatgttgagctcctgtgccgagctctcctcttcctgctcaagatacatttt
gggcagatcacaagcaaccagacgctggtgacagtgattgaaaatctgaagaaaaccacc
atctccagagtcagtgaggcccgggatgtgctgggattcaacatggcaggactccagttc
ctgaagagggagattgaggcgaaggatgaggtgacattttttgctgatgctactgaacgt
tttgaggagaagaagaggaagaggaagaagaaagagaagatggttcttgcattgctctag

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