Corvus cornix (hooded crow): 104687228
Help
Entry
104687228 CDS
T03546
Symbol
EMG1
Name
(RefSeq) LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104687228 (EMG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccw03009
]
104687228 (EMG1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
104687228 (EMG1)
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
90S particles
Other 90S particles
104687228 (EMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
104687228
NCBI-ProteinID:
XP_039416557
LinkDB
All DBs
Position
1:28333905..28338027
Genome browser
AA seq
234 aa
AA seq
DB search
MAAPRRPRGDAQEEEEDEGCALEAKRPRGQRRLLVVLEGXSLETVKVGKMFELLNCDKHK
ALLLRNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTKKNVLIEVNPQTRIPRTF
DRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHLPVGCMKIGTSFAASQVSDLRELV
PAAEPVVIVVGAFAHGSVSVDYTEKMVSISNYPLSAALTCAKITTAFEEVWGVV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccaggcggccacgtggggacgcgcaggaggaggaggaggatgaagggtgt
gcgctggaggccaagcggccccgcgggcagcggcggctcctggtcgtgctggaggggncg
agtctggagaccgtgaaggtggggaaaatgttcgagctgctcaactgcgacaagcacaag
gcactgctgctgcggaacggccgggaccccggggaggttcggcctgacatcacccaccag
agtctcctgatgctcatggacagccccctgaatcgggctggtctcctgcaggtttatatt
cataccaagaaaaatgttctaattgaagtcaatccccaaaccagaatcccaagaactttt
gatcggttctgtggtcttatggttcaactgctgcataagctcagcgttagagcagctgat
gggcctcagaaactgctgaaggtgattaaaaacccagtcagcgaccatctgcctgtgggc
tgtatgaagattggtacctctttcgcagcatcacaggtgtcggacctgcgtgagctggtt
cctgcagcggagccagttgtcattgtggtgggagcttttgcccacgggtcggtcagtgtt
gactatacagaaaagatggtctccatcagcaactatcccctctctgctgccctgacatgt
gctaaaattactactgcctttgaggaagtgtggggagtagtatga
DBGET
integrated database retrieval system
