Corvus cornix (hooded crow): 104687294 Help Entry 104687294         CDS       T03546                                  Symbol HIF1A Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism ccw  Corvus cornix (hooded crow) Pathway ccw04137   Mitophagy - animal ccw04140   Autophagy - animal ccw04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ccw00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104687294 (HIF1A)    04137 Mitophagy - animal     104687294 (HIF1A)    04148 Efferocytosis     104687294 (HIF1A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ccw03000]     104687294 (HIF1A) Transcription factors [BR:ccw03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     104687294 (HIF1A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH Motif Other DBs NCBI-GeneID:  104687294 NCBI-ProteinID:  XP_039408603 LinkDB All DBs Position 5:5759257..5790315 Genome browser AA seq 811 aa AA seqDB search MDSPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM LKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAI DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPQSAATITIFQQG QTAPSSAEEMKLAAECGDDAKTIIVPSSPVRGVAESSSAPASPYGGSRSRTASPIRARKG AVDQVEKPSPGAPSLLTVTLNKRSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG SLFQQTGDRGGNASLAWKRVKGCKTNGHSGGEQKTIILLSTDIASKLLGQSMDESGLPQL TSYDCEVNAPIQGNRNLLQGEELLRALDQVN NT seq 2436 nt NT seq  +upstreamnt  +downstreamnt atggacagccccggcggcgtcaccgacaagaagaggattagctctgaacgcaggaaagag aagtcgagggatgcagcccggtgccggaggagcaaggagtcggaagtgttctatgagctg gctcaccagctgcccctgccgcacaccgtgagcgcgcacctggacaaggcgtccatcatg aggctgaccatcagctacctgcgcatgaggaagctgctggatgctggtgagctggagaca gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggctttgtc atggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg ggactcactcagtttgagttgacggggcacagtgtatttgatttcactcatccgtgtgac catgaggagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag caaaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga acagtgaatataaagtctgctacgtggaaggtgctgcactgcactggccacatccgtgtg tacgacacgtgtgggaaccagactcactgcggatacaaaaagcctcccatgacctgcctg gtgttgatctgtgaacctattcctcacccatcaaacattgaggtccccctggacagtaaa acgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattaca gagttgatggggtacgagccagaggagctcctgggtcgctcaatctatgagtactatcac gcactggattctgatcatctgaccaaaacacaccacgacatgttcacaaaagggcaggtg acaacaggacagtacagaatgctggcgaaacaaggtggctatgtctgggttgaaactcaa gcaactgttatatacaacactaagaattcacagccacagtgcatagtgtgtgtgaactac gtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgtatg ctgaaaccagtggagtctcctgacatgaaaatgaccaaaatattcagtaaagatgacctg gatgataccaacagcctatttgaaaaactgaaacaggaaccagatgctttaactgtgctg gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca gagccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttct gatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgat gtggataatgatatggccagtgaattcaaactggaattagtggagaaactctttgccata gatacagaagcaaaaaatccattctctactcaggaaactgatttagatttagagatgttg gctccttacatcccaatggatgatgacttccagctgcgctccttcgatcagctgtcccct ctggaaagcagctcctccagccctcagagtgcagccaccatcaccatattccagcagggc cagacggcaccgagcagtgcagaggagatgaagctggcggcggagtgcggggacgatgcg aagacgataattgtcccttcctctcccgtgcgcggcgtcgccgaatccagcagtgccccc gcctcgccctacggcgggagcaggagtcgaactgcctctcccatcagagcaaggaaagga gcagtggatcaggtggaaaagccttctccaggagcacccagcttgctaacagtcactcta aataaaagatctactgcactggatgaagaactaaatccaaagatgctagctttgcataat gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattggg tctttattccagcagacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgta aagggatgcaaaacaaatggtcacagtggaggggagcaaaagacaatcattctactatca actgacatagcaagtaaacttctagggcagtcgatggatgagagcggactcccccagctc acgagttacgactgcgaagtaaacgctcccatacaaggcaacagaaacctgctacagggg gaagaactgctcagagctctggatcaagttaactga

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