Corvus cornix (hooded crow): 104687332 Help Entry 104687332         CDS       T03546                                  Symbol RTTN Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism ccw  Corvus cornix (hooded crow) Brite KEGG Orthology (KO) [BR:ccw00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ccw03037]     104687332 (RTTN) Cilium and associated proteins [BR:ccw03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    104687332 (RTTN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N DUF445 Motif Other DBs NCBI-GeneID:  104687332 NCBI-ProteinID:  XP_039405625 LinkDB All DBs Position 2:97066196..97145753 Genome browser AA seq 2231 aa AA seqDB search MELSSLVRKLGHELTEIRERSLKTILFKLDHNLISYADLVHEKALFRNLLEWFNFPVVPV KEEVLNFVNSLIKHPPAAQKMIGIGAVEFFSQLRSDVDPNLQAIIDGIVDGLFFLPSELP SSSLSVCYQAQAQPSADQPVLPQEDLFTGYFCQSRSHLPQLQIPPKRTVVKCLKFSTFPW LTLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDVIIQDFPAEIFLQRPKIVQSLLSLL NLAFGGDGRHQLALQSVSCLQQLCIFLRRRLNFHRDPSFSSSEQGTASQNSSISYCQEAR GAPRSQNPSPGSSSPRPFVIGRTVQRPRGDGQDWDAVSSSGNSTQANANSRISLHSPFDV GHIDLPDIDNEDVLELQMKQLSLPQFCVSILENAIPLLRTGSRRVTMEVLELLVEDMFLI GDAISENVWEDDSLFALELKDKLLLVLGLLGETILYHKSNMSAEQPKVMLVHHRMAFISV SLFTVRLLQILLPVEKASKVTQKSLLNALFLLSLDMSFSLEYPSIHESVAAYLEQMSTEN YSIYKQVSEAAYSIECTSSFMVEVHKEGDRNLSELLELADQALSSLPFHLHFPLLQECIH ICSNIWKSAKANSLLQAEGQKLLLRLLSHPLLNIKAEAYHCCLEVVKDCLGIHNIAKPMS SICQGIHFLLHPKVLYEICTFGLQEDKNEVNSTAKTILIHLLQGQLMMEVLTWNKFIEAL FPVLPVLQGYADTKDTLGKCILSLSETTSDKGEGVLPRTPRLQAALRLLFSKKQLVRSVA AQHLAFHLLNEEGSSLKRPPLDGNVLSSISNLFIVEGAMELKMNDKMDSIIKAETVEKLY DILTSDAVDLVLRKSAAEQLVVILEDTKMHDIVKKLGVKEKILAYLNECVHVDGKLMESI VLPCLTLLRKIVSVDPVVRLSLAQQPSLLLLLFRVSLILQSDRAVLTETAILLCLLLFDE VARTETWADGIASNYTEVPAFSLPVAVVRRYHLPVRIPAHHVVSPNTVVIPLSSECLTMK PVSDMLKTAWNLSWYHGIENLLQLINYEKEAETFLDSLKLSSEDILILKITHTNYGLQDC LSLIIQAASHSDVRTALTRLSFYVLNDRLALKCSSGPFGTTLKSFDWQKAMNRFLQVLPA SVEDEKLLVDVLRFLNKLLREQKSNLESDHLKWILKSFLKNQQKSLLGLLVRTESQVQDE MDETQAAVRQRLDKELIRLFNMLLVCSVSVTDREGLELAGSFRTELALKLLQCLRLTDAP HFYGLPSLERTLQGMVHVTALPGWSTYSAAVEPVTICKKYLTGLLEVISSFYVEWGGNAM SFMGKGVTKSTVLCLLHLSHEMMAQAKDTDWISLWSLPYDNSEEQVLSHLGLAWLVPLWV DRDPEVRFTALGIGSALTSLEKGCIALAESCQNISGGLWGTVINILLDQSECSMVRREAA FILQNLLVIPIPTEDLKDCIWQGPCVHDEESGLSHTGIPALKALLYHCQFYEQVNQMVKH CYLGCYMFDLNSYKEDNLNIEKGGVTDFDDSLNLWKAPPSQSKSSHSHSTSETMILSASP SLGSVTELQATVPSSASFIPETVVDRLTAQGQSDTTITESPSEHDSPMSAALSKQRAVVT PALLSAVCSLLHNLLVVMPKDTGIALQQTHLLTTLSSLVSANLIERCILELKAPLGHRCH TEHVKAQVLLLLQYVSSVSRLLKSCLLVDSHLVSQDELLKPLLGNTFKILTVRPKDGLDT ELTSVLHETWVDFFSFLATLLWKSGQISFPSVTAALANHCTAIIDTISDCVHLSTTYPAL YVASLQFLSVLLNEEGRKQLQDKQSVCQNPTISFLLDHTEGCQAPVTQLTALIIQVCERK SSKDVLKEVATNALLSLLAVSKNAQKCALKADLIDSCIENMKHIHAQLNLVSLKPGKAQR KKEDNLIKELRCSMQLLRNCLFQNEECKMAVLKTHLVPVLHSLWPWFLADDSSMQIALHL LCVYTANHPAGCASLCWASGGQSLLPSARSAAGNSLMHNILKLASHVSNDNSPVQQVVFC LISNLALSHDCKGIIQKSNFLQNFLSLSLPKGSNKNSSNVSTLWLKLLLNISFGEDGQQM VMKINGFLDQIIEMCKYKHKSSQHLALLILHNICFSPANKPKILGNDQAIAVLSACLESN SPAVQRIGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKSSPQPEENELHAYHVK CLENIVQLLDC NT seq 6696 nt NT seq  +upstreamnt  +downstreamnt atggagctgtcgtcgctcgtcaggaagctcggtcatgaactgacagagataagagagcga tctctgaagactattctgtttaaattagaccacaacttgatttcctatgctgatctggtc cacgaaaaagcgctttttcgtaaccttttggagtggttcaatttccctgtcgtaccagta aaagaggaagtattaaattttgtgaacagtttgatcaagcatccacctgctgcccagaaa atgattggaattggtgcagtggaattcttctctcagcttcgctctgatgtggatccaaac ttgcaggccataattgatgggattgtggatggactgttttttcttccttctgaactccct tctagttctttatcagtatgttatcaagctcaggctcagccttcagcagatcaaccagtt ctgcctcaagaggatttattcactggatatttttgtcaaagtagaagtcatctgccgcag ttacaaatacctcccaaaagaacagttgtgaaatgcttgaaattttccacatttccttgg ctaactctgacttcaacagatagacatgttctttcatcaaatgaaagctctttgagaagt aacaaccaaagtttaatttggagtacgtgtgagcttcttcaggatgtgattatacaagat tttcctgcagagatcttccttcaaaggccaaagattgtacagagccttttatctctgcta aacctggcttttggaggagatggaagacaccagttggctttgcagtctgtgtcatgcttg caacagctctgcatcttcttgagaaggaggcttaacttccatagagatccaagtttttct tcctcagagcaaggtacagcttcccagaattcatctatatcttactgtcaagaagcaaga ggtgctcctcgttctcagaatccatcacctggaagtagtagccctcggccctttgtaatt ggacggacagttcagcgtcctagaggagatggtcaagattgggatgcagtatcttctagt ggaaacagtactcaagcaaatgcaaactccagaatctctctgcattccccgtttgatgta ggacatattgacctaccagatattgataatgaggacgttttggaattacagatgaagcag cttagcctccctcagttctgtgtttccatcttggaaaatgcaatacctcttctaagaaca ggcagtaggagagtgacgatggaggttcttgaattgcttgttgaagacatgttccttatt ggtgatgctatttctgaaaatgtttgggaagatgacagcctttttgcattggaattgaaa gacaaattgcttctggtcctgggtttgcttggagagactatattatatcacaaaagcaat atgagtgcagaacagcccaaggtgatgctggtgcatcacagaatggcatttattagtgtt tcactcttcactgttagattgctccaaatacttctccctgtagaaaaggcgagtaaagtt acacaaaagagtttgctgaacgctttattccttctctcactggatatgtccttctccttg gagtacccaagcattcatgaatctgttgcagcctatctggagcagatgagtactgagaac tacagtatttataaacaagtttcagaagctgcatattcgattgaatgcacttctagcttt atggttgaagtgcataaggagggggacaggaatctttctgagttactagaattggcagat caggccttgagtagtctacccttccacctacactttcccttgcttcaggaatgcattcac atatgctcaaatatttggaagtctgccaaggccaactcattgcttcaggcagagggtcag aagttgcttctccgtctattgtctcatcctttgttgaatataaaagctgaagcctatcac tgctgtttggaagtggttaaggactgtttaggtattcataatattgcaaagcctatgtct tcaatctgccagggaatacattttcttctacaccctaaagtgttatatgaaatctgtaca ttcggccttcaggaagataagaatgaggtgaactctacagccaagaccattctgatacat ctgttgcaaggacagttaatgatggaagtattaacttggaacaagtttattgaggccctc tttcctgtccttcccgttttacagggttatgctgacactaaagatactttaggtaaatgc attctctctttgagtgaaacaacctctgacaaaggagagggtgttctcccaagaactccc agactgcaggctgctctgcgccttctcttctcaaaaaaacagctggttcgttctgtagca gcccaacatttagcatttcatcttctgaatgaagaaggttcaagtctgaaacgcccacct ctggatggtaatgtcctttccagcatttcaaacttatttattgtagaaggagctatggag ctaaaaatgaatgataaaatggactcaataattaaggcagaaactgttgaaaagctgtat gatatcttgacttctgatgctgttgacctagttttacggaagtctgcagctgagcagctg gttgtcattttagaagataccaaaatgcatgacattgtgaaaaagttgggtgtgaaagaa aagatattggcttaccttaatgaatgtgtacatgtggatggcaagcttatggaatccata gtgttaccatgtctcacactcctacgcaaaattgtgtctgttgacccagttgttcgcctg tccttagcacagcagccttctttactgcttttgctattcagagtttccctgatactccaa agtgatcgtgctgttttaactgaaactgcaatattgctttgtcttctgttgtttgatgaa gtagcaagaacagaaacatgggctgatggcatagccagtaattatactgaggtacctgcc ttcagtttacctgttgctgttgttagaaggtatcatctgccagtcaggatccctgctcat catgtagttagccctaatactgttgtgataccattgtcttctgagtgcttgactatgaaa cctgtgtcagatatgcttaagacagcctggaatctgtcatggtaccatgggattgaaaac ctactgcagctgataaattatgagaaggaagcagaaacatttttagattctctgaaactt tcctcagaagacattcttatattgaaaataactcacacaaactatggactgcaggattgt cttagtttgatcattcaggcagcatcccacagtgatgttaggacggctctcactaggctt agcttctatgtcttgaatgacagacttgcattaaaatgcagttctgggccttttggaacc actttgaagagctttgattggcagaaagcaatgaacaggtttctacaagtgcttccagct tctgtggaggatgaaaagcttttggtagatgtcttaagatttttaaacaaattgcttaga gagcagaaatcaaatctggagtcagaccatctaaagtggatcttgaaatcatttcttaaa aatcagcaaaaatcccttttgggcctcctggtgcgaacagaatcccaagtgcaagatgaa atggatgaaacacaggctgctgtcaggcagcgactggataaagaactcattcgtcttttt aacatgttgcttgtttgttccgtgtcagtgactgacagagaaggcttggaacttgctggt tctttcagaacagagctggctctgaagctgcttcaatgcttaaggctaacagatgcacca catttttatggacttccttcactggagagaacattacaaggaatggttcatgttactgca cttccaggctggagtacctattctgctgcagttgaacctgtcacaatttgtaagaaatat ttaactggtcttcttgaggtcatctcatcgttttatgttgaatgggggggaaatgccatg tccttcatgggaaaaggtgttacaaaaagcacagtcctttgcttgcttcacttatctcac gaaatgatggctcaagccaaagatacggactggatatctctttggtctttgccttatgat aatagtgaagaacaagttctgtctcatctaggtctggcatggctggttcctttatgggta gatagagatcctgaggtcaggtttacagcacttggaataggatcagctcttacgtctctt gaaaaaggatgtattgctttagcagaaagctgccagaatatttcaggaggcctgtgggga acagtgatcaacatccttctggatcaatctgaatgtagcatggtacgcagggaggctgct tttattctgcaaaatctacttgtgattccaattcctacagaagacttgaaagattgtatt tggcaaggtccttgtgtacatgatgaagaatctggcctctctcacacaggaatacctgca cttaaggcccttttgtatcactgccagttctatgaacaggtgaatcagatggtgaaacac tgttacctgggatgttacatgtttgatttgaattcttacaaggaagacaacctcaacata gaaaaaggtggtgtaactgattttgatgattctcttaatctttggaaggctccaccgagt cagagcaaatcttcacattctcactcaacatctgaaactatgattctgtctgcatcacca tcactggggagtgttactgagcttcaggcaacagttccaagttcagccagttttattcct gaaactgtagttgatcggcttacagcacaaggtcaaagtgatacaaccataacagaatct ccaagtgaacatgattctcccatgtctgctgctctgtctaaacagcgtgctgtagtcaca cctgcccttttgtccgctgtttgcagccttctgcacaatctgctggttgtcatgccaaaa gatactggaattgctcttcaacaaacacatttgctaacaactctcagcagtcttgtaagt gctaatctgattgaaagatgtatcttggaactgaaggctccattgggtcatcgatgtcat acagaacatgtaaaagctcaggtcttgttactacttcagtacgtgtcatctgtgtccagg cttctaaaatcatgtttattggtggactctcatcttgtaagccaggatgaactgttgaaa cctctcttggggaataccttcaagattctcaccgtgcgccccaaagatgggttagatacc gagttaacgtctgtacttcatgaaacatgggtagacttcttcagctttctagctacatta ctgtggaaaagtggccagatatcttttccatctgtgacagcagcccttgcaaatcactgt acagcaataattgataccatttctgattgtgttcatctgtctaccacatatcctgcttta tatgtggctagtttacagttcctctctgtccttttgaatgaggaaggaagaaaacagctc caggataaacagagtgtgtgtcagaatccaactattagctttcttctggatcacactgaa ggatgccaggcaccagtaactcaacttactgcattaattattcaggtctgtgaaagaaaa tcttcaaaggatgtgctgaaagaagttgctacaaatgcactgctgtctctgttagctgtc agtaaaaatgcccagaaatgtgctttgaaagctgacctgatagacagctgtatagaaaac atgaagcacattcacgcgcagctgaatttggtttccctaaagcctgggaaagcacagaga aaaaaggaggataaccttattaaggagttacggtgttctatgcagctccttagaaactgc ctctttcaaaatgaagaatgcaaaatggcagtactcaaaactcatcttgttcctgttctg cattctctatggccgtggtttttagcagatgactcctcaatgcaaatagctctgcatttg ctttgcgtctacactgcaaaccatcctgcaggttgtgcttcactttgttgggccagtggt ggacaatcattacttccgtctgcacgaagtgcagctggcaattcattaatgcataacatc ttgaaattggcttcccatgtgtcaaatgataacagcccagttcagcaggtggtcttttgt ctaatatctaaccttgctctgtctcatgactgtaaaggcattattcagaagagtaacttc ctgcagaactttttatctctttcattaccaaaaggaagtaataaaaattctagtaatgtg tctactctctggctaaagctgctactgaacatatcttttggagaagatggacaacagatg gtcatgaagataaatgggtttttagaccagatcattgaaatgtgtaaatacaagcacaag agcagccaacatctagcacttcttattctacataacatatgttttagtccagctaataaa ccaaagatattaggtaatgatcaagcaattgcagtactgtctgcctgtttggaaagtaac agtcctgctgttcagagaataggagcagcttcgctttgggctttgcttcacaactatcaa aaggcaaaagtgactttgaagaatccatccataaggagaagaatagatgaggcttattct ttagtgaagaaaagttctccccagccagaagaaaatgaactacatgcctaccatgtaaaa tgcttagagaatatagtgcagcttcttgattgttaa

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