Corvus cornix (hooded crow): 104687394
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Entry
104687394 CDS
T03546
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104687394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104687394
03036 Chromosome and associated proteins [BR:
ccw03036
]
104687394
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104687394
Coactivators
SAGA/TFTC/STAGA complex
104687394
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104687394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
104687394
NCBI-ProteinID:
XP_010394789
LinkDB
All DBs
Position
11:19774675..19920857
Genome browser
AA seq
1009 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKALSDLVGSLESQLAGGRGPAEPPPPRTSAPSQQPQPQQ
GSLAGGSSPGRQQHGRPAPPPAPGAGEVAGRPGSAGSRAPAQGPLPSPSPPAAAAAAAGR
GASVNSSSVQQSHGAAPGGGSPAAPALPQPAAPAQPVNNHVAAAAAAARDAGSPGPGPSP
PAADSAPGAAGGGGTLAGGGGAAGAAEGAAAAPAPRPGEAAPNGEGAGARAAAVPPVSGH
GGAAAAQPQPAAGALPAVTALGASASPAPAPPAPGSAPPAPAAPAAPKPAVTAKAGAALP
AAPQAVSPRPALGAAPRIVAPQLIVRPPPQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQ
QALAQAQMQAQVQTQGQGPASLSPRLSVPTTGPVFRLSTAQQPTSVAASSVRLGLPVQAK
VVPSTAAPVSATATLPGGAVLSHTTVSVATTSAQNLFKTTVATGTSSSQQPAVITGGQSQ
GSAQPQGQPRLPLPPHTAAQVPAQPLVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKL
ASHNSPSPETSRNVKALVQDLLDAKIDPEEFTGRLQTELKSSPQPYLVPFLKKSLPALRQ
SLLNSQHLVLQGQPSQQSLQQTKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSN
TVQPPQVKVVQSNQSSQLQIIQSTSAQTVKRTPACQTTQIRMPVVITQTIRPQGTVGKAP
TIQASKSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNS
DLVGTQIQSCKDEPFLAAIPLHKRILETAKKLGITDVPAEVVTFISHATQNRLRTVIEKV
TVITQHRMESYKDDEWYEQATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQE
DPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDAPGLLTIGGEGVGVCA
GSQAGLGTASPRQYPRQKITRVNLRDFIFYMEQEREMSHSLLLYRALLK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcgtcggacccactagaggagatgctgctcttctccgaggaggtggac
gagaaggcgctcagcgacctggtgggatccctggaatcgcagctggccggcggccgcggc
cccgccgagccgcccccgcccaggacctccgccccgtcccagcagccgcagccgcagcag
gggagcctggcggggggcagcagccccggccggcagcaacacggccgccccgcgccccct
cccgcgcccggggcaggggaggtggcggggcgccccggcagcgcggggagccgagcccct
gcccaggggcctctcccgtccccgtctcccccggcggcggcggcagcggcggcggggagg
ggagcgagtgtaaacagtagtagtgtgcagcaatcacatggagcggctcccggcggcggc
agccccgccgcgcccgccctgccgcagcccgccgcccctgcccagcctgtcaacaaccat
gtggccgctgcagccgccgccgcgcgggacgcggggagccctggccccggccccagcccg
cccgccgccgacagcgcgcccggggccgcggggggcggcgggaccctggcggggggcggc
ggagcggcgggagcggccgagggcgccgccgctgcccccgcgccgcgccccggcgaggcg
gcgcccaacggggagggcgcgggggcccgggcggccgcggtgccgcccgtcagcgggcac
ggcggggccgccgccgcgcagccccagcccgcggccggcgcgctgcccgcggtcaccgcg
ctcggcgcctccgccagccccgcgcccgcaccgccggccccgggctcggccccgccggcc
cccgcggcccccgccgcgcccaagcccgcggtcacggccaaggcgggcgctgccctgccc
gccgccccccaggccgtgtcgccgcggccggcgctgggcgctgccccccggatcgtggcc
ccgcagctgatcgtgcggccgccgccgcagactaccatccagctgccccccggcttcacc
atcccgcccgggatggtcctggtgcgcacggatgctggacagctcgtgatggtgccccag
caggctctggcacaggctcagatgcaggctcaagtgcagacacagggacagggtcctgcc
agcctgtcacccaggctttctgtgcccacaactggccctgtttttcgcctgtcaacagct
cagcagccaacatccgtggccgcctccagcgtccgcctgggcctccccgtgcaagccaag
gtggtgccatcgacggctgcgcccgtcagtgccacggccacgctgccaggaggggctgtg
ctctcccacaccacggtatcagtagctacgacgagtgctcaaaatttgttcaagacaaca
gtagcaacgggaacttcatcttctcaacagcctgcagtgatcactggtggacagagccag
ggctcagcccagccccaaggtcagccccggctgccactcccccctcacacagcagcacag
gtaccagcacagcccctggtcattcccagctctcctgtgcctggaactacggttgtatcg
caggaaatgcaagagaatgtgaaaaaatgcaaaaactttttagctacccttataaaactt
gcttctcataactcaccatcaccagaaacatcccgcaatgtgaaagctctggttcaagat
ttgttggatgcaaagattgatccagaagaatttacaggccgccttcaaacagaactcaaa
tcatctcctcagccatatcttgtacctttccttaagaaaagtctacctgcactgagacaa
tctttactgaatagtcaacatttggttttgcaaggacagccgtctcagcagtcactccaa
caaaccaagctctcacaagttatacctcaatctgcctcgggaagcatttcctctgttgtc
acaacgcagacaataggaataaggcaaccaaacaacatttgcaccgtctctgtatcaaat
acagtgcagcctcctcaggttaaggtggtacagtcaaatcagagttctcaactgcagatt
atccagtcaacatctgctcaaactgtgaaacgaacccctgcttgccagactacccagatt
aggatgccagtggtaataactcagaccattagaccacaaggcacagtagggaaggcacca
acaatacaagccagtaaaagtcctgggggctttggtgttcaggtctctgcaaatcagaaa
aacaagctgaatgaccctggaggtggttctttcagagatgacgatgacatcaatgatgtt
gcctctatggctggtgttaatcttaatgaagaaagtgcccgaattatggctaccaactct
gacttggttggaacccagatccagtcctgtaaagatgaaccctttcttgctgctatacct
ctccataaacgcatacttgaaacggctaaaaaactaggaattactgatgtgccagctgag
gtcgttacttttatttcccatgcgacacagaacagattaagaacagtgatagaaaaagtg
acagtgataacccagcaccgaatggagtcatacaaagacgatgaatggtacgaacaagcc
acagatgtccgatcacagctgaagttctttgagcagttggagcgtttagaaaagcaaagg
aaagatgaacaagagagggaaatcttgctgaaggctgctaagagtcgctcaaggcaagaa
gacccagagcaagctagactgaaacaaaaagcaaaggagatgcagcagcaagagcttgcc
cagatgaggcagagggatgccaatctaacggcactggcagccatcggtccccggaagaaa
cggaagctggatgcacctggcctgctcaccataggaggagagggtgtgggggtgtgtgct
ggcagccaggccgggctgggcacggcctccccccggcagtacccccggcagaaaatcacg
cgcgtgaacctcagggacttcatcttctacatggagcaggagcgagaaatgagccattct
ctgctgctctaccgagctctgcttaaataa
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