Corvus cornix (hooded crow): 104687411
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Entry
104687411 CDS
T03546
Symbol
CDH5
Name
(RefSeq) cadherin-5 isoform X2
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04514
Cell adhesion molecules
ccw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104687411 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104687411 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104687411 (CDH5)
04090 CD molecules [BR:
ccw04090
]
104687411 (CDH5)
Cell adhesion molecules [BR:
ccw04515
]
Cadherins
Major cadherins
104687411 (CDH5)
CD molecules [BR:
ccw04090
]
Proteins
104687411 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
104687411
NCBI-ProteinID:
XP_010394809
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All DBs
Position
11:19026689..19056399
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AA seq
772 aa
AA seq
DB search
MSHFILLFSLFLAPAFADGGSQKSTQNLCSNDVSHKRQKRDWIWNQMHIKEEIDTPLPHH
VGKITSSVRNNNAKYIIEGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRTN
NRSLERPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVSGHA
TVTYQVTKGGEYFTIDDSGVIYTKEPNLDRETKSTYEIVVQAKDAPGFSGDSSTATVIIT
LSDINDNFPVFKHSSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTRYSFIQGEFRDTFD
IVANPYTNEGIIRPKKPLDFETVAEYRFSIEATDPTVNLRHFKPGNPRSISRVTIEVTDV
DEPPVFTKLPYEFKVRENHAEVKTLGSVHAEDPDAAKRKIRYIQRRASPNGDYVRVSNNG
VIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDVNDNAPELVSPEEP
RVCENAAPGKVIVRISAVDKDETSPRGFFRYLLATEDSNFSLAENYDNTANITVKYGQFN
RELAKFHYLPVLISDNGDPDLTSTNTLVISVCKCNEKGNFTFCEERAKQVGVSIQALVAI
FVCIFTIIVIALLILLRKRHKKDLSGLGRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLN
SVRKNGLKAEAAPSLYAQVQKPPENITPGAGGMEMMIEVKKDEADNDRDLLPYDTLHIYG
YEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSEDFVY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagccactttattctacttttctcattgttcctggctccagcatttgctgatggagga
agccagaaatcaacccaaaacctttgttcaaacgatgtcagccacaagcgccagaagaga
gactggatatggaaccaaatgcacatcaaggaagagattgatacacctttgccacaccat
gttggcaagatcacatccagtgtaaggaacaacaacgccaagtacatcatagagggtgaa
tatgccaacaccattttcaaggtggaggagaccagtggggacgtctacgccttcgagagg
ctggacagggagaagaaggcagagtatgagctgacagccctcattattgacagaacaaac
aacaggtcactggaacgcccctccaaattcatcatcaaggtgtatgatatcaacgacaat
gcccctgtgtttgtacaaaaggtgttcaatggatctgtcccagaaatgtcaccagtagga
acctcagtcaccaaagtgacagctgtggatgctgatgacccaacagtgtcaggtcatgcc
acagtgacctaccaagtcactaaaggaggcgaatatttcaccattgatgactctggagtg
atttatacaaaagagcctaatttagacagagagactaaatcaacgtacgagattgttgtt
caagccaaagatgctccggggttttctggggattccagcacagccacagtgatcatcact
ctgtccgacatcaacgacaacttcccagtgttcaaacactcgtcttttcactttaaagtt
cctgaaaacatttcagtgggaggagaagttggcagagtcaaagtagaagatattgatgaa
ccacaacacagaaatacaagatacagctttatccaaggagagttcagggacacctttgac
attgtagccaatccatacacaaatgaaggaatcattaggccaaagaagcccctggacttc
gaaacagtagcagaatacaggtttagcattgaagcaacagaccccaccgttaaccttcgc
catttcaaacccggcaacccccggagcatctccagagtcaccatcgaagtcaccgatgtg
gatgagcctcctgtctttactaaactcccatatgaatttaaagtgagggaaaaccatgca
gaagtaaaaacacttggttccgttcatgcagaggaccccgatgctgctaaacggaaaatc
agatatattcagcgtagagctagccctaatggagactacgtcagagtatccaataatgga
gttattcagcttcccaagcctctggacagagaattcagctcctcatacaacatcactgta
gcagctgtggagatccttgaagatggccgtctttccgacagagagtcacatgcccacgtt
cacgtcatagttgatgacgtaaatgacaatgctccagaacttgtttctcccgaggaaccc
cgagtgtgtgaaaatgctgcaccaggaaaggtgatcgtcaggatttcagctgttgacaag
gatgagacatcacccagaggtttcttcagatacctactggccacagaagatagcaacttc
tccctggctgagaactacgataacaccgctaacatcactgtcaaatacgggcagtttaat
cgggaacttgccaaattccactacctgcctgtcctcatctcagacaacggcgaccctgac
ctcaccagcacaaacactcttgtcatcagtgtctgcaagtgcaacgagaaaggcaacttc
actttctgtgaggagagggcaaagcaggtcggcgtcagcatacaagcactggtggcaatt
tttgtctgcatcttcacaatcattgtaattgcattgctgatcctgctaagaaagaggcac
aagaaggatctgagcggcctcgggaggaacgtggcagagatccacgagcagctggtcacc
tacgacgaggagggaggtggtgagatggacaccaccagctacgacgtgtccgtgctcaac
tccgtccgcaagaacggcctgaaggcggaagccgctccctctctgtacgcacaggtccag
aagccccctgaaaacatcacccctggagctggggggatggagatgatgatcgaggtgaag
aaggatgaggctgacaatgacagggatttgctgccctacgacactctgcacatctacggc
tacgaaggcgccgagtccatcgcggagtccctcagctctctgggctcgggctcctcagac
tcagacattgattatgactttctcaacgactggggacccaggttcaagatgctggctgag
ctctatggatcagaaccaagtgaagattttgtgtattaa
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