Corvus cornix (hooded crow): 104687419
Help
Entry
104687419 CDS
T03546
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X3
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104687419 (TDRD12)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104687419 (TDRD12)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104687419 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
104687419
NCBI-ProteinID:
XP_020440028
LinkDB
All DBs
Position
11:16257696..16315100
Genome browser
AA seq
1187 aa
AA seq
DB search
MQQFYDNYKDAGEIKGEEIEKGQVYVVFCEELQCWCRALVESVQRQADGCQLRCFLVDYA
RYCSVASENMRVLVRAFAKIPYRATKCRLYCTKPLTLCIDYCEDTAKIGPAKRWDAAAIQ
HFRKLLEEATEVKATVQAVEEKVLEVFLFVTVGDDKICVNDDLIAKHFAYYKEAEGSSSD
DSDNEVSLNAKYVPLEFIGPTFVARPKLPFGEVSPPVEPGLAGWNSALEKICQRSSTVIN
DNTVPVVNMVPGLPSKEDKAVQTDRLPQSLNSNSLQTHPVEDDQQSLQNVGEEKNFVFLS
KKIEPSSVLETAPLFDGLKKELSWNKFSGPTFTESYCWPPAAQGYDVIVISHQGKDPLLY
IPPVLTLLQLESDYQALPNMGGPLALILCPGWKKAQLVFDLLKTYKKSCRYLHPMLIILG
QNKEAASQVEIRDCKVVVTTPHNLLRLLEHNTWLLLRLCHLVLDEIEVLLSDTTEKVFTI
LDCYKKATAQARGNPSRQIIAVGTQWNKHIIPLIKEFMNDPYIVITVIEEAAIFGNVQQV
VQPCMSSSKTAELLKILDFTQKNLQKVLVCTDSVTEVEIIHKALKSNSIVSLKKHKESKC
NAKCVLERWRKMHSSGTLAVLVLADDCLQPLGITDATCVIHFSFPSPGVFRQRLQCMTDN
FCTVIKDSAVDQEHTKAKSVILLTENSSCHAPGILHCLKRAEAEIPEELNDSAARVRESE
ENEKFSRPLCASLKTFGICRNRTACPDRHQINLSMDMAQNTADEMIETPDRVTILPLHIV
HATNYFGRIVKKQEDQYTVLAKEMNDYFEVPGHRISVNIVEKSVFYGLCEGAICHRVQVV
ETPAKDEENVCEVTIKYIDEGRTSQVKSDQLLHLPAKFQSLPAQAVEIIVCRVKPIDNEV
EWNPKVTDHINHKIKGKLHHAKVVHTLGKTVWVDPMVRVTNLPVLKIRINEYSIRSEILS
TGLGTDNPEHIAEIQKLCRQMPVLDHAKNLEHLSTKEDTAGLEEVSSPQDTLIEEDSAES
CNTSATPPSDDAVQAKEAEDSTVHQQKGCHPQIKWFQDNVTVTLRLQMLKAADSKCEFSK
EKVVFSAYSEGRLYAADLELYQSIIAEKSTCVIKDREAVILLVKEKKGEWCKLLKNKNVH
VSLDFEHWEESEDETPFTVGSAKLSYPPAGYEDWFESSEDSDTESDD
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagttctatgataattataaagatgcaggtgaaataaaaggagaggagatagaa
aagggccaggtttatgtggttttctgtgaggaactccagtgctggtgtagggcacttgtg
gagtcagtccagcgccaggcagatggttgccagctcagatgttttcttgtggattatgcc
agatactgttctgttgcatcagagaacatgcgagttttagtgcgagcatttgccaagatc
ccatatagagcaacgaagtgtcgcctgtactgcacaaagccactgacgttgtgtattgac
tactgtgaagacactgccaaaataggaccagcgaaaagatgggatgctgctgctatccag
cattttcgaaaacttcttgaagaggctactgaggttaaagccacagtacaggcagtagaa
gagaaagtgttagaggtgtttctttttgtgactgtaggagatgacaagatctgtgttaat
gatgatctgattgcaaagcactttgcttattataaggaagctgaagggagttcttcagat
gattctgacaatgaagtgtctctcaatgctaagtatgttccactggagtttattggtcct
acatttgttgccaggccaaaactgccctttggggaggtgtcaccacctgttgagccaggt
cttgctggttggaattctgctcttgaaaagatatgccagaggtcaagcacagttataaat
gacaacactgtgcctgtagtcaacatggtgccaggtttgccttccaaggaagataaagca
gttcaaacagacaggcttccacagtccttaaattccaactccctccagacacacccagtt
gaagatgaccaacagagtcttcaaaatgttggggaggaaaaaaacttcgtgttcctgagc
aagaaaattgagccatcatcagttttggaaacagcaccactttttgatggtctgaaaaag
gaactttcttggaacaagttttcagggcctaccttcacagagtcctactgttggccgcca
gcagctcagggatatgatgtcattgtcatctcccatcagggaaaggatcccttattgtat
attccaccagttctcacacttctgcagttggaaagtgactaccaagccttgccaaacatg
ggtggacccctagcactcattttatgtcctggatggaagaaggcccaacttgtttttgac
ctactgaaaacatacaagaaaagttgcagataccttcatccaatgttgataatccttggg
cagaacaaggaagcagccagccaagtggaaatccgagactgcaaagtagtagtgactaca
ccgcacaacctcctgagactgctggaacataacacttggttattgcttaggctttgccat
cttgttcttgatgagatcgaggtgctgctgtctgacactactgaaaaggtgtttactata
ctggattgttacaagaaagccactgctcaggcacgggggaatccatcacgtcagatcatt
gctgtgggaactcagtggaataaacacatcatacccttgataaaggagttcatgaatgat
ccttacattgtgataacagttattgaagaagctgccatctttggaaatgtgcaacaggtg
gtgcagccttgcatgagcagcagtaaaactgctgagttactgaaaatactggattttacc
cagaagaatcttcagaaggtgctggtatgcactgactcagtaactgaagtagagataatt
cataaggcactgaagagcaactcaatagtttccttgaaaaaacataaggagagcaagtgt
aatgccaagtgtgtcttggagaggtggagaaaaatgcacagttctggcactcttgctgtg
ttagttttagcagatgactgcctgcagcctttgggaatcactgatgcaacctgtgtgatc
catttcagtttcccatctccaggagtcttcaggcagcgcctacaatgcatgactgacaac
ttctgcactgtgataaaggattctgctgtagatcaagaacatacaaaggccaagtcagtc
atcctgctgacagagaacagttcctgtcatgcacctggaatcctccactgtttaaagcgt
gcagaagctgaaattccagaagaacttaatgattcagctgccagggtgcgagagtctgag
gaaaatgagaaattttcaaggcccctgtgtgcttctcttaaaacttttgggatttgcaga
aacagaacagcatgtccagatcgtcaccaaattaatttatcaatggacatggcccagaat
actgcagatgaaatgatagaaacacctgaccgtgtgacaatcctgcctctccacattgta
catgcaacaaactactttggtcgaatagtcaagaaacaagaggaccaatacacagttctt
gctaaagaaatgaatgattacttcgaggtaccaggacataggatttctgttaacatcgtg
gagaagtcagtgttttatgggttatgtgagggagccatttgccacagggttcaggtggta
gagactccagcaaaagatgaagaaaatgtctgtgaggtcacaattaaatacatagatgaa
ggcaggacaagtcaagtgaagagtgatcagctgcttcacttacctgcaaagttccagagt
ctgccagctcaggctgtggaaattatagtttgtagagtaaaacccatagataatgaagtt
gaatggaatccaaaggtgacggatcacattaaccacaaaattaaaggaaagcttcatcac
gcgaaagtggtccataccttgggaaagacagtttgggttgacccaatggtcagggttacc
aaccttcccgtgttgaagatacggatcaatgagtacagtattcgatctgagattttgtcg
acgggtttgggaactgataatcccgaacatatagcagaaattcagaagctgtgcagacag
atgccagttttggaccatgcaaagaacttggagcatttaagcacaaaagaggacacagct
ggtctagaggaggtgtccagcccacaggatacattgatagaggaagattctgcggaaagc
tgtaacacttctgcgactcctccaagcgatgatgcagttcaagcaaaagaagcagaagac
tctactgtgcatcagcagaagggttgtcatccacaaatcaagtggtttcaagataatgtg
actgtgacactgaggttacaaatgctgaaggcagctgacagtaaatgtgagttttctaaa
gagaaggtggttttcagtgcttattcagaaggcagactttatgcggctgacctggagctg
tatcagtcaataattgctgagaagtccacatgtgtgattaaggatagagaggctgtgatt
ttactggtaaaagagaaaaaaggagaatggtgcaaattactaaagaacaagaatgttcac
gtgtccttagattttgaacactgggaagagtctgaagatgaaacgccttttacagttggt
tctgcaaaactgagttatcctcctgcaggatatgaggactggtttgagtcctcagaagac
agcgatacagaaagtgatgactaa
DBGET
integrated database retrieval system
