Corvus cornix (hooded crow): 104687515 Help Entry 104687515         CDS       T03546                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism ccw  Corvus cornix (hooded crow) Pathway ccw03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccw00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104687515 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccw03021]     104687515 (SF3B3)    03041 Spliceosome [BR:ccw03041]     104687515 (SF3B3)    03036 Chromosome and associated proteins [BR:ccw03036]     104687515 (SF3B3) Transcription machinery [BR:ccw03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      104687515 (SF3B3) Spliceosome [BR:ccw03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     104687515 (SF3B3)  Complex B     104687515 (SF3B3)  Complex C    U2 SnRNP specific factors     104687515 (SF3B3) Chromosome and associated proteins [BR:ccw03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      104687515 (SF3B3)     TFTC complex      104687515 (SF3B3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MMS1_N CPSF_A Motif Other DBs NCBI-GeneID:  104687515 NCBI-ProteinID:  XP_039414559 LinkDB All DBs Position 11:complement(7810965..7840281) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctaacgttgcagcgtgccacaggcattagctttgctatccatggc aatttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcctggagtta ctccgccctgatcccaacacagggaaggttcacactctgctgaccgtggaagtgtttgga gtcatccggtccctcatggcctttaggctgacgggggggactaaagactacatcgtggtg ggcagcgattcggggcgcattgtcattctggagtaccagccttccaagaacgtctttgag aagatccatcaggagacctttggcaagagtggatgtcgcagaatcgtcccaggccaatac ttggctgtggacccaaagggccgtgctgtcatgatcagtgccattgaaaagcagaagctg gtgtatatcctgaacagagatgctgctgctcgactcactatttcctccccactggaagcc cacaaggccaataccttggtctaccatgtggtgggagtcgatgtgggatttgaaaaccca atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccgacaggcgaagct gcagccaacacacagcagacattgacgttttatgaactggacttgggtttgaaccacgtt gtcaggaaatacagtgagcccctggaagagcatggcaacttcctcataacagttcctggt ggttctgatggccccagcggggtgctgatctgttctgaaaactatattacttacaaaaac tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac ccagagaggggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgc gtgctgaaaacaggctttctctttgtggcatctgaatttggaaaccattacctgtaccag atagctcacctgggggatgatgatgaggagccagagttttcttctgccatgcctcttgag gaaggagacacattcttttttcagccacgacctctgaagaacctggtgctggtggatgag ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca ccccagttgtatgtggcttgtggtcgggggcccaggtcgtccttgagggttttaagacat ggacttgaggtatccgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg actgtgagaagacatgttgaagatgaatttgatgcctacattattgtgtccttcgtaaat gctacgctggtactgtctatcggagagactgtagaagaagtgactgactctggattcctg ggtactacacccaccttgtcctgctctcttcttggcgatgatgctttggtacaggtttat ccagatgggatccggcacatccgagcagataagagagtaaatgaatggaagacaccaggg aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga ggagaactggtttactttgagatggacccgtcgggacagctgaatgagtacacagagaga aaggagatgtcggccgacgtcgtttgcatgagcctggccaatgttccccctggggagcag cgttcccggttccttgctgttggactggtggacaacactgtcagaattatttcacttgac ccttcggattgcttacagcccctgagtatgcaggcgctgcccgcacagcccgagtcactg tgcatcgtggagatgggtggcacagagaagcaggatgagctgggagagaggggctccatt ggctttctgtacctgaacattgggctgcagaacggtgtgctgctgcgaaccgtcctggac cctgtcactggcgatctttctgacaccaggacccgataccttggctcccggcctgtcaaa ctcttccgtgtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg cttagttattcctatcagtcacgcttccacctgactcccctgtcttacgagacactggag tttgcatctggttttgcttctgagcaatgccctgagggcattgtggccatctccacaaac acgttgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttcccg ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatt gagacagaccacaacgcttacaccgaggccaccaaggcgcagaggaagcagcaaatggct gaggaaatggtggaggctgcgggtgaggatgagagggagctggctgcagagatggctgca gcctttctgaacgagaatcttcctgagtccatctttggtgctcccaaggcaggaaatggt cagtgggcttctgttatcagagtgatgaaccccatccagggaaatacgctagatctggtc cagctggagcagaatgaagctgctttcagcgtggccgtgtgccggttctccaacactggt gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccacgctcagtt gctggagggtttgtctacacatacaagctggtgaatagtggtgagaagctggaatttctg cacaagacccctgtggaggaggtccctgcagccattgctccattccaaggccgagtctta attggagttggaaagctcctgcgtgtgtatgacctgggcaagaaaaaactgcttcggaaa tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg attgtttcagacgttcaggagagtttcatctgggtgcgctacaaaaggaatgagaaccag ctcattatctttgctgatgacacttacccccggtgggtcactacagcaacgctcctggat tatgacactgtggctggagccgacaagtttggtaacatctgtgtggtgagattgcctccc aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggc ctgcttaatggagcatcgcagaaggctgaagtgattatgaattatcacgtgggagagacg gtgctttccttgcagaagaccacactgattccaggaggctctgaatctcttgtttatacc acgttatcaggggggataggaatcttggtcccttttacttcccatgaggatcatgacttc ttccagcatgtggaaatgcacttacggtctgagcaccctcctctctgtggacgagatcat ctcagtttccgctcctactacttcccagtgaagaacgtgattgatggggacctgtgtgag cagttcaactccatggagcctaacaaacagaagaatgtggctgaggagctggaccggacc ccacctgaggtgtccaagaagctggaggacatccgcacgcgctacgcgttctga

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