KEGG   Corvus cornix (hooded crow): 104687628
Entry
104687628         CDS       T03546                                 
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccw03036]
    104687628 (WDHD1)
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    104687628 (WDHD1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 HMG_WDHD1 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_EML HMG_box WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st eIF2A Beta-prop_WDR75_2nd Beta-prop_IFT122_1st NBCH_WD40 HMG_box_2 KNTC1_N Beta-prop_SCAP
Other DBs
NCBI-GeneID: 104687628
NCBI-ProteinID: XP_039409164
LinkDB
Position
5:complement(3187437..3214294)
AA seq 1128 aa
MPSTQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMHANHVTFSRDGTKVAAGSSDFMIKV
VEVTDSSKQKTFRGHDAPVLSLSFDPKDVYLASASCDGSVRVWNIADQTCTTSWLLLQKC
NDVINAKSICRLAWQPGTGKLLAVPVDKVVELFRRETWDSQFDLSDASITQPLNVVVWSP
CGQFLAAGSVDGNIVVWNVETQQCIERMKHEKKYSICGLAWHPKYKQIAYTDTEGNLGLL
ENIGDVEKPNDKAASAEAKDYNDLFDGDDDDLNGDMIEPPSSPKTGDNEDDADDLMQPPG
HIRRALIDDDDDNSLDIGLIKASSGLLEKEDDGDDQTGGFSALPPSSTQQPFYDGPMPTP
RQKPFQSGSTPVHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSVHHATHLPNSLGHT
MADLSTEAILLACESTEELASKLHCIHFGSWDANKEWTVDMPKDEEIEAICLGQGWAACA
TTALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMIVYHRGTGFDGDQCLGVQLMELGT
KKKQILHGDPLSLTRKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNTREHC
KGKYDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQVATEKGQMEEQ
YWRSVVFHNHMDYLSKNGYEFDENAKNQAVKEQQELLMKLFALSCKLEREFRCVELADLM
THNVVNLAIKYASRSRRLNLAQRLSEMAVEKASELAAAQEDEEEEEEEEEDFRKHSNAGY
SSSAMERSRLPGRNVQQDQDVEDAEETDAYEEAEETPEVHQEKEPNPSSKGVISPEVTAP
KSALVASSSRGRVNPFKVTSSKKDPVVPSGNVLDNMTKYSKKTSLSGSRAGNKQNPPVIK
PLTPKPKTKQALAASFFQPRTPITNPAEKTVEEREEKAENESQEAKVTAQENTENRRPKT
GFQMWLEENRANILTDNPDLNEAEVIKEGMSRFRMLTSEERMVWTEKARGGRVNDSTEDK
KRKRPAAEEDEVKKSQEQKSEDTNVSKKSKPLDQSTNNRLSAFAFKQS
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgccatcaacgcagaagccaatgcggtatggccacaccgagggacacaccgatgtctgc
tttgatgacaccggcagctgcattgtaacttgtggcagtgatggcgatgttaggatttgg
gaaaacttggatgacgatgatccaaaatccattaatgtgggagaaaaggcctactcgtgt
gctctgaagaatggaagactgatcacagcagtctccaacaacactgtccagatccacaca
tttcctgagggagctccagatgggatcctcactcgtttcaccatgcacgcgaaccacgtc
acctttagtcgtgatggcaccaaagttgctgctggatccagtgactttatgatcaaagtt
gtggaggtgactgatagcagcaagcagaaaacattccgaggacacgatgctcctgtttta
agcctgtcttttgaccccaaggatgtttacctggcctcagcaagctgtgacggttccgtc
agagtctggaacattgcagatcagacatgcacgacaagctggctactgctgcagaaatgt
aatgatgtgataaatgctaaatcaatctgcaggcttgcctggcaacctggcactgggaag
ctgctggcagttcctgtagataaagttgtagaactgttcagaagagaaacctgggatagt
caattcgatctgtctgatgcctccatcacacagcccttgaatgttgtggtctggtctcct
tgtgggcagttcctggcagctggaagtgtggatgggaatatagtggtgtggaatgtggaa
acccagcagtgcatagagaggatgaagcatgagaaaaaatactcaatttgtggactggca
tggcaccctaaatataagcaaattgcttacacagacactgaaggaaacctggggctgttg
gaaaatatcggtgatgtagagaagccaaatgacaaggctgccagtgcagaggccaaagac
tacaacgatctgtttgatggagatgatgatgatttaaatggggatatgattgaaccacct
tcttccccaaaaactggagataatgaggatgatgctgatgaccttatgcaacccccaggc
catataaggcgggcactaattgatgatgatgatgataactcactagatattgggttgata
aaagctagttctggtcttcttgaaaaggaggatgatggtgatgatcagactgggggcttt
tcagctttgccaccgtcatctacacaacagcctttctatgatgggccaatgccaaccccc
aggcaaaagcccttccagtctggctccactcctgtgcatctcatgcatcgattcatggtg
tggaattcagttggaatcattcgctgctacaacgatgagcaggacaatgccatagacatt
gaattccatgacacctctgtgcatcacgccacacacctccccaactccctgggccacacc
atggctgacctctccactgaagccattttgctggcctgtgagagtacagaggaacttgca
agcaagctccactgcatccattttggctcctgggatgccaacaaggagtggactgtggat
atgccaaaggatgaagagattgaagccatctgtctaggtcagggctgggctgcctgtgct
accactgccctgctggtccgtgtgttcacagttggaggagttcagaaagagatcttcagt
ctcccaggcccagtggtgtccatggcaggacacggagagcagctgatgattgtttatcac
agaggtactgggtttgatggggaccagtgcctcggggtccagctgatggaactaggaacg
aagaaaaaacaaattttgcatggagaccctctttctcttacaaggaaatcctatttggtg
tgggttggattctctgcagaaggtaccccttgttacgtggattccgagggaatcgtgcga
atgctgaaccgaggacttgggaacacttggatcccggtgtgcaacaccagagagcattgc
aaagggaaatatgaccattattgggtcgttggcatccatgaaaacccccagcagctcagg
tgtattccttgtaaaggagcccggttccctcccaccctgccacgacctgctgtagccatt
ctgtcttttaaacttccttattgtcaagttgcaacagagaagggacagatggaggaacag
tactggcgttctgttgtatttcacaaccacatggattacttgtcaaaaaatggctatgaa
tttgatgaaaatgctaaaaatcaggcagtaaaagaacagcaggaacttctaatgaagctg
tttgctctttcctgtaagctggagcgtgagttccgctgtgtggagctggctgacctcatg
acccacaacgtggtgaatttggccatcaaatacgcctcccgctcccgcaggctgaactta
gcccagcgcctcagcgagatggctgtggaaaaagcctctgagctggcagcagcacaggaa
gatgaggaggaggaggaggaggaagaagaggatttccgaaaacactcgaacgctggctac
agcagctctgccatggagcggagtcggctgccaggcaggaatgttcagcaggaccaagac
gtggaagatgctgaagaaactgatgcctatgaggaagcagaagaaaccccagaagtgcat
caagagaaagagccaaatccttcctccaaaggtgtcatttcaccagaggtgactgctcca
aagtctgctctggttgcatccagcagccgaggacgagtgaatccatttaaggtgacatca
agcaaaaaggacccagtggtcccctcaggaaatgttttagacaatatgaccaaatactca
aagaaaacatctttgtctggcagcagagctggaaacaagcagaaccctccagttataaag
cctctgacacccaaacccaagaccaagcaggctttagcagcctccttcttccagcctcgc
acacctataactaatcctgctgaaaaaacagtggaagaaagagaagaaaaagcagaaaac
gagtcccaagaagccaaagtcactgcacaggaaaacactgaaaacagaagaccaaagaca
ggtttccagatgtggctagaagagaacagagcaaacattttgacagataatcctgatctg
aacgaagcagaagtaataaaagaaggcatgagtcgatttagaatgctgacatcagaggaa
aggatggtgtggactgagaaagcaagaggaggaagagtcaatgactcaacagaagacaaa
aagcgaaagcgtcctgcagctgaggaagatgaagtgaaaaagagccaggagcagaaatcc
gaggacacaaacgtatccaaaaaatccaagcctttagatcaatccacaaacaacagattg
tcagcttttgccttcaagcagagctga

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