Corvus cornix (hooded crow): 104687635
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Entry
104687635 CDS
T03546
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104687635 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104687635 (TAF4)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104687635 (TAF4)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104687635 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
104687635 (TAF4)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104687635 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
104687635
NCBI-ProteinID:
XP_010395133
LinkDB
All DBs
Position
20:10122373..10158742
Genome browser
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGASEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGAGAPTVTLVRPPIHTAGPTVAAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSSVPAAPATQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGSAQTTALGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRIQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacaagcaccagcaccaccactgcagca
gcaggagcatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacagtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgactgccaaccctgctcctgcacctgctgttgcccctctcgttaac
aatggacctggatctgtggggaaaggaaacgctgttaatgctgttttgccctcagcttct
aacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcctcctcctcg
cccacagtgatctcctcgcagccaccaccaagtgttggcgccggggcgcccacggtaacg
ctcgtgaggcccccaatccacacagcaggacccacggtggctgcagctggtgcagccact
cagaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttctctccagacgtcacttgtgaacagccagtct
ggttcctctgtgccagcagctcctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccaacagcagacactggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctctaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaacaccaaccacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaactaac
attcagaattttcagttaccaccaggcatggtcctcgtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaagccttggcgcagatgcaggcacaggcacatgcccagtctcag
cctcagaacactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacgcccattattgcacgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaacaacagtgcaacccacgacaacgctacagcgtccc
ccggttgtgcaacctcagattgttctgggtggttctgcacaaacaaccgcgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacggccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaagcagtcctcagagactgcggctaacgtgaaagaatta
gtacagaacctgctggatggaaaaattgaaccagaagactttaccagtaggctgtacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccg
acgacgcaggcgacgatagccacgatcccgtcggcggcggccgtgctgctgagctcctcg
gtgcagcgcacggcgggcaaggccactgccactgtcaccagtaccctccagcaacccgtc
atcagcctcactcagcccacacaagttggtgtcagtaaacaagggcagtccacgccactg
gttatccagcagtctcaaaaagcaggggcattgataaggcctccacaagtaacgttgaca
cagacacccatggtggcattgcggcaaccacacagtcgtattatgctcactactcctcaa
atccaactgaatcagcttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcaca
ttaacaaggtcctgtaaagatgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaagcacggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagaatacaaaacctagtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggccaaggagatgcagcagcaagagctagcacagatgagacagagg
gacgccaacctgactgcgttagctgccatcggtcccagaaagaaaaggaaagtagattca
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
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integrated database retrieval system
