Corvus cornix (hooded crow): 104687774
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Entry
104687774 CDS
T03546
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104687774 (PTPRT)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104687774 (PTPRT)
Protein phosphatases and associated proteins [BR:
ccw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104687774 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
PTP_tm
ig
Ig_3
TM_ErbB1
PTP-NADK
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
104687774
NCBI-ProteinID:
XP_039419246
LinkDB
All DBs
Position
20:3197800..3627812
Genome browser
AA seq
1519 aa
AA seq
DB search
MTGVAAIVFLLQLLPRADGQVFPGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMD
PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKV
NGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLA
HPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHR
RFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLW
IKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPG
EGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVHY
QYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPG
PVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLR
NETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTT
ITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAA
ELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKA
VLGRQQVTTRNPPSLLSTGASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLT
IKRRIFCSSDRPSIFRRNAYSYSYYLHSSQCFRGLSVFYRTRKLAKKQKETQTSTQREMG
PVATSDKTSTKLSAVHNEEAFSSSCQDVNGFTSPSPCSFSVQSKTLQSKSMLNSYYSVSS
DTVPSTTLLDSSHGEMAQPTLTIQTHPYRSCEPVEMSYPQGQFQPAIRVADLLQHITQMK
RGQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPHSDY
INANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVRYWP
DDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYATGL
LGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVRELRSQ
RVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSIYYNISRLDPQTNSSQIKDEFQTL
NIVTPRVRPEDCSIGLLPRNHDKNRCMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQ
PAAFIVTQHPLPNTIADFWRLVFDYNCSSVVMLNEMDAAQLCMQYWPEKTSCCYGPIQVE
FVSADIDEDIINRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEK
WQEQYDGRDGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVE
SLEQYKFVYEVALEYLSSF
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgtcgccgcgatcgtctttcttctgcagctcttgcccagggcggacggacag
gtcttcccaggtggttgttcgtttgatgagcactacagcaactgtggttatagcgtcgcc
ttgggaaccaatggatttacctgggagcagatcaatacctgggaaaagccaacaatggat
cctgctgtcccaactggctccttcatgatggtgaacagctctgggcgagcatcggggcag
aaagctcacctgctgctgcccacgctgaaggaaaatgacactcactgcatcgacttccac
tattacctgtccagcagggaccgctccagccccggctccctcaacgtctacgtgaaggtc
aacggggggccccagggcaatcccatctggaacgtctcgggagtggtgaccgaagggtgg
gtgaaggcagagctggccatcagcaccttctggccacatttttatcaggtgatatttgaa
tctgtctctttgaaaggacaccccgggtacatagctgtggatgaagtcagagttctcgcc
catccctgcagaaaagccccccatttcctacggctgcagaacgtggaggtgaacgtgggg
cagaacgcgacgttccagtgcatcgctggggggaagtggtcccagcacgacaagctctgg
ctccagcagtggaatggacgggacacagccctgatggtcactcgagtggtcaaccacagg
cgtttctctgccacggtcagcgtggccgacacatcgcagcgcagtatcagcaagtaccgc
tgtgtcatccgctccgacggcggctccggggtctccaactacgccgagttaattgtgaaa
gagccgcccaccccgatcgcccctccagagctgctggctgtgggggccacgtacctatgg
atcaaacccaacgccaactccatcatcggggacgggcccatcatcctgaaggaggtggag
taccgcaccaccacgggcaactgggcagagacgcacattgtggactctcccaactacaaa
ctgtggcacttggaccccgacgtggagtacgagatccgagtgctgctcacgcgccccggg
gaagggggcacggggccccccggaccccccctcaccaccaggaccaagtgtgcagatccc
gtgcacgggccgcagaacgtggaggtggttgacatccgctcgcggcagctgacgctgcag
tgggagccctttggctacgccgtgacacggtgccacagctacaacctcactgtccactac
cagtacgtcttcaaccagcagaaattcgaggcagaggaactcatccaaacttcttctcat
tacaccctgcgggggctccggcccttcatgaccatcaggctgaggttggccctctccaac
cccgagggcaaaatggaaagcgaggagctggtggtgcagactgaggaggatgttcctgga
cctgttcccttggaatctatccaaggaggaccttttgaagagaagatctacgttcagtgg
aagcctccaaatgagacaaatggcatcattacactctatgagatcacatacaaagctgtt
gggtctctggatcccagtgccgacctgtccagccaaagagggaaagtcttcaagctgagg
aacgaaacccatcacctctttgtgggattatacccaggcactacctattcattcaccatc
aaagccagcacagtcaagggctttgggccgcccatcaccacccggattgcaactaagatt
tcagcaccgtccatgccggagtacgacacggactctcccctcaacgagactgacaccacc
atcactgtcatgctgaagcctgctcagtcccggggagcacctgtcagcgtctaccaactc
gttgtcaaggaggagaagctgcagaaagcccgcagagctgcagacatcattgagtgcttc
tctgtgccagtgagctacaagaatgcctccagtctggactctccacactactttgcagcc
gagctgaagcccatcaaccttcctgtcacgcagcccttcaccgtgggcgacaacaagacc
tacaatggctactggaacgctcccctttcccctctgaaaagctacagcatatacttccag
gctcttagcaaggccaatggagaaacaaaaatcaactgtgtccggcttgcaacaaaagca
gtgctaggtagacaacaggtgaccacgcgaaacccgcccagcctcttgagcacaggagct
tccacccagaattccaatgcagtggaaccagaaaagcaagttgacagcacggtgaaaatg
gctggagttatagctggtctcctgatgtttgtgattatcctcttgggagcaatgcttacc
atcaagagaaggatattttgttcatctgaccggccatcaatatttagaagaaatgcatat
tcctactcctattacttgcattcaagccagtgttttaggggcctctctgtcttctacagg
accaggaagctagccaagaagcagaaggagacccagaccagcacgcagagggagatgggt
cccgtggctacttctgacaagacctccaccaaactcagtgctgttcacaatgaagaagct
ttttcttccagctgccaagatgttaatggattcacatcaccctctccttgttcattttct
gtccaaagcaaaacccttcagagcaaatctatgttgaattcctactactcagtatcatca
gacaccgtcccatcgaccacgctgttagacagcagccatggcgagatggcccagccaacc
ctgaccatccagacccacccataccgcagctgcgagcccgtggagatgtcctacccccag
gggcagttccagccggccatccgagtggcagatctgctgcagcacatcacccagatgaag
aggggacagggctatggattcaaggaggagtatgaggcactccctgaggggcagacggcg
tcctgggatacggccaaggaggatgagaaccgcaacaagaacagatatggaaacataatc
tcctatgatcactcaagagtgagattgcagctgctggatggggaccctcactccgactac
atcaacgccaattacatcgatggctaccatcggcctcgccattacattgcaactcaaggg
ccgatgcaagagacagtgaaggatttttggaggatgatttggcaagaaaactctgcgagt
gttgtcatggtcaccaacctggtggaagtgggcagggtgaagtgtgttcgatactggccg
gatgacacagaagtctacggagatattaaagtcacattaattgagacagagccattggca
gagtatgtcatacgtacattcactgtccaaaagaaaggctaccatgagatccgagagatt
cggcagttccacttcaccagctggccggaccacggcgtcccctgctacgccacggggctc
ctgggcttcgtgcgccaggtgaagttcctcaaccccccggaggcaggacccatcgtggtg
cactgcagtgctggggccgggaggacagggtgctttattgccatcgacatcatgctcgac
atggcagagaacgaaggcgtggtggatatattcaactgcgtgcgagagctgcgctcccaa
agggtcaacttggtgcagacagaggagcagtacgtgtttgtccatgatgccattctggag
gcatgtctctgtggcaacacggccattccagtctgtgagttcagatccatatattacaac
atcagcagattggatccacagaccaattccagccagataaaagatgagtttcagaccctg
aacatcgtgacgccgcgggtgcggccggaggattgcagcatcgggctgctgccccgcaac
cacgacaagaaccgctgcatggacgtgctgcccctggaccgctgcctgcccttcctcatc
tccgtggatggcgagtccagcaactacatcaatgctgcactcatggatagccacaagcaa
cctgctgccttcattgtcacccagcaccctttgcccaacaccatcgcagacttctggagg
ctggtgtttgactacaactgctcctccgtggtgatgctcaacgagatggatgcagcacag
ctctgcatgcagtactggcctgagaagacatcctgttgttacggcccaatccaagtggag
tttgtttccgcagacattgatgaagatatcatcaaccggatattccggatttgcaacatg
gccaggccgcaggacgggtatcgcatcgtgcagcacctgcagtacatcggctggccggct
tacagggacacccctccctccaaacgctccctgctgaaggtggtcaggaggctggagaag
tggcaggagcagtacgacggcagagacgggcgcactgtggtccactgcctgaacggcggg
ggacgcagcggcaccttctgtgccatctgcagcgtgtgtgaaatgatccagcagcaaaat
atcatcgacgtgttccacatagtgaaaacgctacggaataacaaatccaacatggtggag
tcactggaacagtataaatttgtatacgaggttgcactggaatacttgagttccttttag
DBGET
integrated database retrieval system
