Corvus cornix (hooded crow): 104687829
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Entry
104687829 CDS
T03546
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1 isoform X1
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104687829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104687829
04090 CD molecules [BR:
ccw04090
]
104687829
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
SIRP family
104687829
CD molecules [BR:
ccw04090
]
Proteins
104687829
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
C1-set
Ig_3
C2-set_2
Ig_2
ig
V-set
I-set
SIT
Insulin_TMD
Protocadherin
DUF6479
TMEM132_C
Pho88
Motif
Other DBs
NCBI-GeneID:
104687829
NCBI-ProteinID:
XP_039419135
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Position
20:7717728..7729896
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AA seq
502 aa
AA seq
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MEPHPRDPGRTAWALPCLLLLALPGVGAQLDQNFKLQQPQDKVLVTAGEMLTLNCTMSRL
APPGPVRWLKGLGSGNKTVYGPAGDSLPRVTRAVVGSDTDFTIHIRNIQPEDMGTYYCVK
FARGVTGVEEVLQRGSGTEVSVQAKPSPPLVSGPEQRAMPGQSVPFTCTTGGFLPKEIGV
KWFKNKDPMTAQPPQVTEEPVKSYNVSSTVMVTLQKDDVRSQLICEVQHSTLPAPLRGTY
QLSRTLRVPPSVEVRAEPSPVEVNKTVTFTCHMKEFYPANMSVSWLENGIEIKVENISRP
SELPRGLFELRHQVEVQATEEKNGSTITCMVVHDAQAPVNYSAVLWISNPAQGGLSKGSQ
MDTDDMLIYIVVGVVCIVLVLLVAAILYLIRTKQIKAGKSSPSARLHEPEKSSEATTQES
DPNNLTYADLNFDKERKTIRRMVEMSQQSEYACIQTNQAPNGDDNLTYADLDMVHLSKAP
KRSAPRPEEAGSEYASVQITRK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcatccccgggatcccggccgcaccgcctgggcactgccctgcctgctgctg
ctcgccctgcccggtgtgggtgcccagctggatcagaacttcaagctgcagcagccccag
gacaaggtgctggtgacagcgggagagatgctcaccctgaactgcaccatgtccagactc
gctccaccgggtcctgtgaggtggctgaagggcttgggcagtgggaacaagactgtctat
ggcccggcaggggactccttaccccgtgtgacgagagcagtggttgggtccgacacagac
ttcaccatccacatcaggaacattcagcctgaggacatgggcacctactactgcgtgaag
tttgccaggggagtcactggtgtggaggaggtgcttcagcgtggaagtggcacagaggtg
tctgtgcaagccaaacccagccccccgcttgtgtccgggcctgagcagagagcgatgccg
gggcagtcggtgcctttcacctgcacgactggagggttccttcccaaagaaattggggtg
aaatggttcaagaacaaggaccccatgacggctcagccgcctcaggtcaccgaagagccg
gtgaaatcctacaacgtgtccagcacagtgatggtgaccctgcagaaggatgacgtccgc
tcgcagctcatctgtgaggtgcagcactccacgctgccggccccgctgcgtgggacgtac
cagctcagcaggaccctgcgagttccccccagtgtcgaagtgcgtgctgagccgagcccc
gtcgaggtgaacaagaccgtgaccttcacctgccacatgaaggagttttacccagcaaac
atgtctgtttcctggctggagaacgggattgagataaaggtggagaacatctcccggcca
tcggagctgccccggggcttgttcgagctgagacaccaggtggaggtgcaagcgacagag
gagaaaaatgggtccacgatcacctgcatggtggtgcacgatgcccaggcccctgtcaac
tactcagccgtcctgtggatctccaacccggcccaggggggactgagcaaggggtcccag
atggatacggacgatatgctcatctacatcgtggtgggcgtggtctgcattgtgctggtc
ctgctggtggcagctattctgtacctcatccggacgaagcagatcaaggcaggtaaaagc
tcgccgtctgccaggttacatgagccagagaagagcagcgaggccacgacccaggaatct
gaccccaacaacctgacctacgcggacctgaacttcgacaaggagaggaagaccatccgc
cggatggtggagatgagccagcagtcggagtatgcctgcatccagaccaaccaggcaccc
aatggcgacgacaacctcacctatgccgacctggacatggtgcacctcagcaaggcaccc
aagcggtcggccccgcgccccgaggaggccggctctgagtatgccagtgtccagatcacc
aggaagtga
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