Corvus cornix (hooded crow): 104687888
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Entry
104687888 CDS
T03546
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccw03032
]
104687888 (TOP1)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104687888 (TOP1)
DNA replication proteins [BR:
ccw03032
]
Eukaryotic type
DNA Topoisomerases
104687888 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
104687888
NCBI-ProteinID:
XP_039419375
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Position
20:5214211..5280856
Genome browser
AA seq
766 aa
AA seq
DB search
MSGDQLHNDSQIEADFRANDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSS
EKKHKDKEKTKHKDGSSEKHKDKHKDKDKEKRKEEKVGSSSGDIKIKKEKENGFSSPPRI
KDEPDDDGFYASPKEDSKPLKRPREDDDADYKPKKIKTEDIKKAKKRKQEEEEDSKAKKV
KSKDKKVPEADKRKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVK
FYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTSEEKSTITNLSK
CDFTHMSQYFKAQSEARKQMSKEEKQKIKEENERLLKEYGYCVMDNHKERIANFKIEPPG
LFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKIPAPPPGHKWKEVRHDNKVTWLVSWTEN
IQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVAL
YFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEYVVEFDFLGKDSIRYYN
KVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQDLMEGLTAKVFRTYNASITLQ
QQLKELTNPDDNIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLA
DARRELKSAKADAKVRRDEKSKKTVESKKKAVQRIEEQLMKLEVQATDREENKQIALGTS
KLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMAEEDYEF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggaccagctgcacaacgattcccagatcgaggcggatttccgagcgaacgat
tctcacaaacacaaagataaacacaaagaccgagaacaccggcacaaagagcacaagaag
gacaaggaaaaagaccgggaaaagtccaagcacagtaatagtgagcacaaagattcctcg
gaaaagaaacacaaagacaaggagaaaaccaaacacaaagatggcagctcagagaaacac
aaagacaaacacaaagataaagacaaggagaagagaaaggaagagaaggtgggttcatct
tctggtgatataaaaataaagaaggaaaaggaaaatggtttctccagtccgccacgtatt
aaagatgaaccagatgatgatgggttttatgcatctcctaaagaggactccaaacccctg
aagagacctcgagaagatgatgatgctgactacaaacccaagaaaatcaaaacagaagac
atcaagaaagcaaagaaaaggaaacaagaggaggaagaggacagcaaagcaaagaaagtc
aagagcaaagataagaaagtccctgaagcggacaaaagaaagaagccgaaaaaagaagag
gagcaaaaatggaaatggtgggaagaagagcgctaccctgaaggcattaaatggaagttc
ctagagcacaaaggtcctgtatttgctccaccatatgaacctctgcctgaaaatgtcaag
ttttattatgatggtaaagtcatgaagctgagtaccaaagcagaagaagttgctacattc
tttgcaaaaatgcttgatcatgagtacactacaaaggagatcttcaggaaaaacttcttc
aaggactggagaaaggaaatgacctctgaagagaagagcactatcaccaacctcagcaag
tgtgacttcacccacatgagccagtatttcaaagctcagtcggaagctaggaaacagatg
tccaaggaggagaaacagaaaatcaaagaggagaacgagcggctattaaaggagtatggt
tactgtgtgatggacaaccacaaggagaggattgccaactttaagattgaacccccaggt
ctcttccgaggtcgtggcaaccatcccaaaatgggaatgttgaagagacgcatcatgcct
gaagacatcatcattaactgcagcaaggattccaaaatccctgcccctccaccaggacac
aaatggaaggaggtccggcatgataacaaggtgacctggctggtgtcatggactgagaac
atccaaggctctatcaaatatatcatgttgaaccctagctcaagaattaagggtgagaag
gactggcagaagtacgagacagctcggaggttgaagaagtgtgtagataaaatccggaat
caataccgagaagactggaaatccaaagagatgaaagtacggcagagggctgtcgcactg
tacttcattgacaagcttgccctgagagctggtaatgaaaaagaagaaggagagacagct
gacaccgtgggctgctgctctctgagagtagagcacatcaagctgcatcctgaactggat
gggcaggaatacgtggttgagttcgacttcctcgggaaggactccatccgatactacaac
aaagtccctgtggagaagagggtgtttaagaatcttcagctgttcatggagaacaagcag
cctgaggatgacctctttgaccgcctcaataccagtatcttaaataaacaccttcaagac
cttatggagggactgacagccaaggtattccgtacttacaatgcctccatcacgctacag
cagcagctcaaggagctcactaatccggatgacaacatcccagcaaagatcctctcctac
aaccgtgccaacagagcggtggccattctgtgtaaccaccagagagctccacccaaaacc
ttcgagaagtccatgatgaacctgcagagcaagattgatgccaagaaggagcaattagct
gatgccaggagggaactgaaaagcgccaaagctgatgccaaggtccggagggatgagaag
tctaaaaagacagtggagagcaagaagaaagcagtgcagaggatcgaggagcaactgatg
aagctggaggttcaggctacagatagggaggagaacaagcagatcgctttgggcacctcc
aaactcaactatctggatcccaggatctctgttgcttggtgtaagaagtggggaattcct
atagagaagatttataacaaaacccaacgagagaaatttgcctgggctatcgacatggca
gaggaagactatgagttttaa
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