Corvus cornix (hooded crow): 104687889
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Entry
104687889 CDS
T03546
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104687889 (DHX35)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104687889 (DHX35)
Spliceosome [BR:
ccw03041
]
Complex C
Other components
Complex C specific factors
104687889 (DHX35)
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
UPF0203
Motif
Other DBs
NCBI-GeneID:
104687889
NCBI-ProteinID:
XP_039419502
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All DBs
Position
20:4201535..4230357
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AA seq
712 aa
AA seq
DB search
MAAPVRPVKFWKPGSEGPGVSVSEERQSPAESSAVTVIYNPYASLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
ADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEG
RTFPVDIFYLQSPVPDYVKSTVETTMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA
LARTGMKKHLRVLPMYAGLPSPEQLKVFERVPHTVRKVIVATNIAETSITVHGIAFVIDC
GFVKLRAYNPRTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPKSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPSQKTQAARQHRRFAV
EEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPSSVLYAEKPPRWVVYNEVIQ
TAKYYMRDVTAVESSWLLELAPHFYQQGTVRNRQKGQTHLSLKAKRAKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgaggccggtgaagttttggaagccgggctcagaaggtcctggtgtc
agtgtctcggaggagaggcagagtcctgctgagagcagtgctgtgaccgtcatctataac
ccttatgcttccctctccattgaacagcaaaggcaaaagctgcctgtttttaagctaaga
aatcacatactttacctagtggagaattaccagactctggtgattattggggaaacagga
tgtggaaaatcaacgcagattccacaatacctggcagaagctggctggacagctgaagga
agagttgttggggtgacacagcctcgtcgggtcgctgctgtttcagttgcaggccgagtt
gctgatgaaagaggtgcagtgctgggacatgaggttggatattgtattcggtttgatgac
tgcacagacccacaggctacaagaattaagtttctaactgatggtatgctggtgagggaa
atgatggctgatcctttattaacaagatacagtgtcctcatgctggatgaagctcatgaa
aggactctttatacagacattgccattggcttactaaaaaaggttcagaagaagcgtggg
gatcttcgcctgattgtggcttcagccaccttggatgcagagaaattcagggatttcttt
aatcagaatgataccggtgaccccagcaaagacaccagtgtgatccttactgtggagggg
aggacgtttccagtggacatcttttacttgcagagccctgttcctgactacgtaaagtca
actgtggaaactacaatgaaaattcaccagatggagaatgatggtgatatactggcattt
ttaactggccaggaggaagtggagactgttgtttccatgctcatagaacaggctcgggcc
ctcgctcgcactgggatgaagaagcacctccgtgttctccccatgtatgccgggctgcct
tctcctgagcagctgaaagtgtttgagagagtccctcacactgtcaggaaggtgatcgtg
gccaccaacatcgctgagacctccatcacagtccatggcatcgcctttgtgatcgactgt
ggctttgtgaagctgcgggcctacaaccccagaacggccatcgagtgcctggtggtggtg
cccgtgtccaaagcctcggccaaccagcgggcagggcgtgccggccgcaaccgctccggg
aagtgctacaggctctacacagaggaggactttgagaagctgcccaagtccacggtcccg
gagatgcagcgcagtaacctggcccctgtcatcctgcagctcaaggctttggggatcgac
aacgtgctcaggttccccttcctttcgcccccccctgcacagtcaatggtgcaagcttta
gaactgctgtacgctttaggaggtctggatatgcactgccgattaacagagccccttggg
atgagaatagcagagtttcctttgaatcctatgtttgcaaagatgcttctggaatcagga
aattttggctgctcccaggagattttgacaattgctgccatgatgcagattcaaaacatc
tttgtgatccctccaagtcaaaaaactcaggctgccaggcaacacagaaggtttgctgtg
gaggagggtgatcatctcaccatgctgaatgtttatgaagcctttgtcaaacacagcaag
agctcccagtggtgtcaggaacactttctgaactacaaagggcttgttagagcttctgtt
gtaagagagcagctgaaaaaacttctcgtccgctttaaagtgccaaagaagtccagtgaa
ggtgatccagatcctgttttgaggtgcatagtttctggattttttgctaatgcagctaaa
ttccactccacgggagcttacaggactatccgtgatgaccacgagcttcatatccacccc
agctcagtgctgtatgcagagaaacctccacgctgggtagtttacaatgaagtcatacag
actgctaaatattacatgagagatgtgacagctgttgaatcctcctggctcttggaactg
gcacctcacttttaccagcaaggaacggtacggaatcggcaaaaaggccaaacgcatctt
tccttgaaagcaaaaagggctaaagtagatgaccactga
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