Corvus cornix (hooded crow): 104687946
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Entry
104687946 CDS
T03546
Symbol
PTPRJ
Name
(RefSeq) receptor-type tyrosine-protein phosphatase eta isoform X1
KO
K05698
receptor-type tyrosine-protein phosphatase eta [EC:
3.1.3.48
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104687946 (PTPRJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104687946 (PTPRJ)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccw04090
]
104687946 (PTPRJ)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104687946 (PTPRJ)
Protein phosphatases and associated proteins [BR:
ccw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104687946 (PTPRJ)
CD molecules [BR:
ccw04090
]
Proteins
104687946 (PTPRJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
PTP_tm
Sina_TRAF
Pur_ac_phosph_N
F5_F8_type_C_2
PTP-SAK
Tc-R-P
PTP-NADK
DSPc
PTPlike_phytase
Y_phosphatase3
Y_phosphatase2
DUF2627
Syndecan
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
104687946
NCBI-ProteinID:
XP_039408540
LinkDB
All DBs
Position
5:complement(48848062..48922354)
Genome browser
AA seq
1308 aa
AA seq
DB search
MRRLPLPCLLLLLLPPLLLLLAEVRCTIACTEDCSSKNVTAEPATSSNDDLSVISASGNR
TSAGGRVTRAVSDGTREPSPISSLTAEYIGVTSVILTWSVNNTASKPEKYRVEIVNAAPV
EILNDTKAEITELIPGTMYSFTVYAVVNGNDTEGVSLSLYTKPSSVVDLEAEYVGVTSVI
LKWMVNDSASDSYTYRIEVVNDTKRNLTFNDTKAEITELIPGTMYNFTVFAVAADNATEG
EGSSIDLYTKPSPVVDLKAEYVGVTSVVLKWMMNDSASDSYTYRIQFVNDTTVSLLTFND
TKAEITKLIPGTMYNFTVFAVAADNKTEGEGSSIDLYTKPSSVVDLKAEYVGVTSVILKW
MVNDSASDSYTYRIEVVNDTKRNLTFNDTKAEITELIPGTTYNFTIFAVAADNKTEGEGR
SIDLYTKPSPVVDLKAEYVGVTSVVLKWMMNDNASDSYTYRIEVVNDTKRNLTFNDTKAE
ITKLIPGTMYNFTVFAVAADDKTEGEGSSIDLYTKPSPVVDLEAEYVGVTSVVLKWMMND
SASDSYTYRIQFVNDTTVSLLTFNDTKAEITELIPGTMYNFTVFAVAADDKTEGEGVSID
LYTKPSPVVDLEAEYVGVTSVILKWMVNDSASDSYTYRIEVVNDTKRNLTFNDTKAEITE
LIPGTMYNFTVFAVAADNKTEGEGRSIDLYTITVSVNSFLCEPVAKQPFLMLKWKCPFGN
NSGFKINISNTHTSREELAPPCTVEGFEQTFQTASLNFFSTYNVSIITLSNGSESSPVDK
LCHTSVSDPPPPSEVPSVKAVSHSSLSVEFSDFDSRNGPLEAYAVMITTEDQGPDSLKSK
LNNTYRDFKKKKTTAYVTYVIKTEQAESSSSHSQNGKNIINVGKGNTMYGYENGPLIPLR
SYRACVAGFTNITFMANMIEGEDSYVSFSPCSEPVLLPQDPGVIAGVVIGCLLAIFAVVA
VGGFIFWRRRRKDKRNNEVSFSPIKIKKSKMIKVENFESYFKKQQADSNCGFAEEYEELK
SAGVHQPKFAAELPENRGKNRYNNVLPYDISRVKLSNQSSGTGDYINANYMPGYNSKKAF
IAAQGPLPNTIDDFWRMIWEKSIYSIVMLTKCMEQARTKCEQYWPDKQPKSYGDIIVTMV
SEVVLPEWTIRDFTVEKSNTPESHMVRQFHFTSWPDHGVPETTDLLINFRHLVHEYNSQN
PMDSPTLVHCSAGVGRTGTFIAIDRLIQQMEMESTVDVYGVVYDLRMHRPLMVQTEDQYI
FLNQCVMDIIRSQRERKTDLIYQNVTAMAIYENFAPGPAFGKANGYHT
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggctgccgctgccctgcctcctgctgctgctgctgccgccgctgctgctgctg
ctggccgaggtcagatgtacaattgcttgcactgaggattgcagctcaaaaaacgtaact
gcagaaccagcaactagtagtaatgatgatttatcagtaatctctgcaagtgggaacaga
acctctgcaggtggaagagtgaccagggctgtgtctgatggaacaagagaacccagccca
attagtagtctcacagcagaatacattggtgtgacttctgtcatcttaacgtggtcagtg
aataacactgcttcgaaacctgagaagtacagggtagagattgtaaatgcggcacctgtg
gagatactcaatgacaccaaagcagaaattacagagttaatccctgggacgatgtacagt
ttcactgtatatgcagtggtaaatggtaatgacacagaaggagtgtccttaagcctgtac
accaagcccagctcggttgttgatcttgaggcagaatatgttggtgtgacttctgtcatc
ctaaaatggatggtgaatgacagtgcttctgactcctacacgtacagaatagaggttgta
aatgatacaaagagaaacctgacattcaatgacaccaaagcagaaattaccgagttaatc
cctgggacaatgtacaacttcacagtatttgctgtagcagctgataatgccacagaagga
gaaggaagttccatagacctgtacacaaagcccagcccagttgttgatctcaaggcagaa
tatgttggtgtgacttctgttgtcttaaaatggatgatgaatgacagtgcttctgactcc
tacacgtacagaatacagtttgtaaatgatacaacagtgtcactcctgacattcaatgac
accaaagcagaaattaccaagttaatccctgggacaatgtacaacttcacagtatttgct
gtagcggctgataataagacagaaggagaaggaagttccatagacctgtacacaaagccc
agctcggttgttgatctcaaggcagaatatgttggtgtgacttctgtcatcctaaaatgg
atggtgaatgacagtgcttctgactcctacacgtacagaatagaggttgtaaatgataca
aagagaaacctgacattcaatgacaccaaagcagaaattactgagttaatccctgggaca
acgtacaacttcacaatatttgctgtagcagctgataataagacagaaggagaaggacgt
tccatagacctgtacacaaagcccagcccagttgttgatctcaaggcagaatatgttggt
gtgacttctgtcgtcttaaaatggatgatgaatgacaacgcttctgactcctacacatac
agaatagaggttgtaaatgatacaaagagaaacctgacattcaatgacaccaaagcagaa
attaccaagttaatccctgggacaatgtacaacttcacagtatttgctgtagcggctgat
gataagacagaaggagaaggaagttccatagacctgtacacaaagcccagcccagttgtt
gatcttgaggcagaatatgttggtgtgacttctgttgtcttaaaatggatgatgaatgac
agtgcttctgactcctacacgtacagaatacagtttgtaaatgatacaacagtgtcactc
ctgacattcaatgacaccaaagcagaaattactgagttaatccctgggacaatgtacaac
ttcacagtatttgctgtagcggctgatgataagacagaaggagaaggagtgtccatagac
ctgtacacaaagcccagcccagttgttgatcttgaggcagaatatgttggtgtgacttct
gtcatcctaaaatggatggtgaatgacagtgcttctgactcctacacgtacagaatagag
gttgtaaatgatacaaagagaaacctgacattcaatgacaccaaagcagaaattaccgag
ttaatccctgggacaatgtacaacttcacagtatttgctgtagcggctgataataagaca
gaaggagaaggacgttccatagacctgtacacaataactgtctcagtgaattccttcctg
tgtgaaccagtggccaagcagcctttcctgatgctgaagtggaaatgtccttttggtaac
aactctggcttcaaaatcaacatatctaatacacatacttcaagggaagagttggctcca
ccctgcacagtagaaggctttgagcaaaccttccaaacagcatctttaaattttttcagc
acctataatgtttctatcataacgctttcaaatggctctgaaagctctccagtggacaaa
ttgtgtcacaccagcgtttctgacccacctcctccaagtgaagttccttcagtcaaggct
gtcagtcacagctcattgtctgttgaattctctgattttgattcacggaatggtccatta
gaagcctacgcagtaatgattacaacagaagatcagggtcctgactctttgaagtctaaa
ttgaacaacacatacagagatttcaagaagaagaagacaactgcctatgttacatatgtc
ataaaaacagagcaggcagaatcatcttcttcccattcccagaatggtaaaaacatcatt
aatgttggcaagggaaacacaatgtatggctatgaaaatggaccgttgatacctcttcgt
tcatacagggcatgtgttgcaggtttcactaatataacctttatggccaacatgattgaa
ggggaagatagttatgtatcattttcaccctgttctgaaccggttttactaccccaggat
ccaggtgttattgctggagtggttattggatgccttttggctatctttgctgtagtcgct
gtagggggcttcatattctggagaaggagaaggaaagataaaagaaataatgaagtttcc
ttttctccaattaaaatcaagaaatcaaaaatgattaaagtggagaactttgagtcatac
tttaagaagcagcaagctgactccaactgtggttttgctgaagagtatgaggaactcaag
tctgctggtgttcatcagcccaaatttgctgctgaacttcctgagaacagggggaaaaat
agatacaacaacgtcttaccatatgatatttctcgtgttaaactttcaaatcaaagctct
ggaactggtgattatattaatgcaaactatatgcctggctataactcaaagaaggcattt
attgctgcacagggtccgttacccaatactatagacgacttctggcgaatgatttgggaa
aagagtatctactctattgttatgttgacaaaatgtatggaacaagcccggacaaaatgt
gagcagtactggccagacaaacagcccaagagctatggtgacattattgtgacaatggtc
tcagaagttgtccttccggaatggacaataagggacttcactgtagaaaagtccaacacc
cctgagagccacatggtgcgccagttccatttcacctcctggccagatcacggagtgcca
gagacaacagaccttctcatcaacttcaggcaccttgttcacgagtacaacagccagaat
ccaatggactctcctactctggtgcactgcagcgctggcgttgggaggacggggacgttc
attgccatcgaccgcctgatccagcagatggagatggagagcacggtggatgtgtacggg
gtggtgtacgatctccgcatgcaccgacccctcatggtgcagactgaggaccagtacatc
ttcctaaaccagtgtgtcatggatatcattagatcccagagagagaggaaaactgacctt
atctaccaaaatgtgacagcaatggcaatctatgaaaacttcgcacctgggccagccttt
gggaaggccaatggctaccacacatag
DBGET
integrated database retrieval system
