Corvus cornix (hooded crow): 104688007
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Entry
104688007 CDS
T03546
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104688007 (FXR1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104688007 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
104688007 (FXR1)
mRNA cycle factors
Stress granule specific factors
104688007 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
104688007
NCBI-ProteinID:
XP_039412937
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All DBs
Position
9:7351846..7385528
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AA seq
677 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKT
VKKNTFFKCTVDVPEDLRDACANENAHKDFKKAVGACRIFYHVETAQLIILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTTIELEEDTGTFRIYGETAEAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRLERLQIDEQLRQIGMGFRPSSTRVPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDNRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSSNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNPPKETVAKTKKETAKDAIDENSPSEKAVNGPATTSGDEPSKLQHSPDEKKVT
VQEDANNQEEAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgttcatgaggactccctcacagttgtatttgaaaacaattggcaaccagagcgc
caggtgcccttcaatgaagtcaggttaccaccaccccctgatatcaagaaggaaatcggt
gaaggagatgaggtggaggtttattctagggcaaatgaccaagaaccttgtggctggtgg
ctggcaaaagttcgaatgatgaaaggagagttttatgttattgaatacgctgcttgtgat
gccacttacaatgaaattgtcacttacgaacgactccgacctgtgaatcagaacaaaact
gtcaaaaagaacaccttcttcaaatgcacagtggatgttcctgaagacctgagagatgcg
tgtgctaatgaaaatgcacataaagatttcaagaaagctgtgggagcatgtcgaattttt
tatcatgttgaaactgctcaactaataatactgtctgccagtgaagcaacagtgaagaga
gtgaacatcctcagtgacatgcacctgcgcagcattcgcaccaaactcatgctgatgtca
agaaatgaggaagctacaaaacacttggagtgcacaaagcagcttgctgcagcatttcat
gaggagtttgtagtcagagaagatttaatgggacttgctataggaactcatggcagtaat
atacaacaagccagaaaggttccaggagttacaaccattgaacttgaagaggataccggt
actttcagaatctatggagagactgctgaggcagtaaaaaaggccagaagttacttggaa
tttgtggaggattttattcaagttcccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagattgtagacaagtctggagtcgtcagggtgagaattgaagga
gacaatgaaaataagctgccccgtgaagatggaatggtaccgtttgtatttgttggtact
aaagaaagcattgggaatgtccaagttctgttggaatatcacatcgcatatctaaaggag
gtagaacaactaagactggaaaggctccaaatcgatgaacagctgcgccagattgggatg
ggcttcaggccttcctccactcgagttcctgagaaggagaagggttacaccactgatgag
agcaccctctcctcagtgcaaggctccaggtcctacagcgggcggggcagaggccgcagg
ggccccaattacacgtctggttacggtacaaactctgagctctctaatccctctgaaaca
gaatctgagagaaaagatgaacttagtgactggtccttggcaggagaagatgacagggag
agcaggcaccaacgagacaacagacgacgtcccgggggacgaggacgtagcgtgtctgga
ggtcgtgggcgtgggggacctcgtggtggaaagtcatccattagctctgtgcttaaagac
ccggacagcaacccttacagcttgctggataacacggagtcagaccagaccgtggacacc
gacgccagcgagtcccaccacagcagcaaccgccgcaggaggtcacgccggcgaaggact
gatgaagatgctgttcttatggatggaatgacagagtctgatacagcttctgttaatgag
aatggtttagatgatagtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagtaacagtagctgattatatatcacgagct
gaatctcaaagtagacagagaaaccctccaaaggagacagtagccaaaaccaagaaagaa
acggcaaaagatgcgattgatgaaaacagcccttctgaaaaggcagtgaatggtcctgcc
accacctctggggatgagccttctaaactacagcacagccctgatgaaaagaaagtcact
gttcaggaggatgcaaataatcaggaagaagcagtgctgaatggtgtttcataa
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