Corvus cornix (hooded crow): 104688029
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Entry
104688029 CDS
T03546
Symbol
NLGN1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104688029 (NLGN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104688029 (NLGN1)
Membrane trafficking [BR:
ccw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
104688029 (NLGN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
104688029
NCBI-ProteinID:
XP_010395667
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Position
9:5028737..5513440
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AA seq
863 aa
AA seq
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MAFPRSVWLNCVWRATVVHLLHMGLNATFAFSILGFLLHAAAVSSQKLDDTNPVVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPSPWADIKNTTQFAPVCPQN
IIEGRLPEVMLPVWFTNNLDVVSTYVQDQNEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKQTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKV
GCNMSDTVELVECLQKKPYRELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGLKFVENIVDSEDGISASDFDFAVSNFVDNLYGYPEGKDILRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAW
ADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDIS
QYTSTTTKVPSTDNTFRPTRKNSVSVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLTHAQEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTIPGIQPLHTFNTF
TGGQNNTLPHPHPHPHSHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcctttccaagatctgtgtggctgaactgtgtatggagagcgacggtggtccacctg
ctacacatgggattgaatgccacttttgctttttctatacttggatttttgcttcacgct
gcagctgtgtcctcccaaaaattggatgataccaatccagtggtgaccaccaactttggc
aagataagagggattaagaaggaacttaataatgaaatcttggggcccgttattcagttt
ctcggggttccatacgctgcccctccaacaggggagcgccgctttcaacctcctgagcct
ccatctccctgggcagatatcaaaaataccacccagtttgctccagtgtgtccccagaac
attatagaaggcaggttgcctgaagtcatgcttcccgtgtggtttactaataacttggat
gtagtttcaacctatgtacaagatcagaacgaagactgcctctatttaaatatctatgtc
ccaaccgaggatgtcaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaatt
tgtagaaaaggaggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagacattcgggacagtgggggacctaagcctgtgatggtgtatattcat
ggagggtcctacatggaaggcactggaaatttatatgatggcagtgtcctagcaagttat
gggaatgtgatagtcatcacagtcaactatcgccttggggtacttggatttctgagcacc
ggggaccaagcggcaaaaggaaactatggcctccttgatctaattcaagctttgcgatgg
actagtgaaaatattgggttctttggtggtgacccattaagaataactgtttttggatct
ggtgcaggcggttcatgcgtcaatctgttgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaaagagcaatagctcaaagcggaacagctctc
tccagctgggcagttagttttcagcctgcaaaatatgccaggatgttggctacaaaagtt
ggttgcaacatgtcagacactgtagaactggtggaatgtctacagaagaagccttataga
gaacttgtcgaccaggacattcaaccagcaagataccatatagcctttggaccagtaatt
gacggcgatgtgataccagatgaccctcagatcttgatggaacaaggagaattcctcaac
tatgacatcatgctgggagttaaccaaggagaagggttgaagtttgttgaaaacattgtg
gatagcgaagatggcatatcagccagtgattttgactttgcagtttctaatttcgtcgat
aacttatacggatatcccgaaggcaaagatatattgagggaaactattaaatttatgtac
acggactgggcagaccgacacaatcccgagaccagaaggaaaacactgctggctttgttt
actgatcaccagtgggttgcaccagcagtggccacagcagatcttcactcgaattttgga
tcgcctacatatttctatgccttctaccatcattgccagacagatcaggtacctgcatgg
gcagatgcagcccatggagatgaggttccttacgtactaggaattcccatgattggtcct
actgagttatttccttgtaatttctccaaaaatgatgtcatgctaagtgcagtggtgatg
acgtactggacaaacttcgcaaaaactggtgacccaaatcaaccagtgccgcaagacaca
aaattcatccacacaaaaccaaatcgttttgaagaagtagcatggaccagatattctcag
aaagaccaactgtatcttcacattggattaaaaccacgagttaaagaacactatagggcc
aataaggtgaacctttggttggaactggtacctcatctgcacaatcttaacgacatttca
cagtatacctctaccacaactaaagtgccatcgactgataatactttcagacccacaagg
aaaaattctgtttcagttacttcagcctttcctacagccaaacaggatgaccccaaacaa
caaccaagcccattttcagtggatcaaagggactactcaacagaattgagtgttactatt
gcggttggcgcatctttgctgttcctgaacattttggcctttgcagcgttgtactacaaa
aaagacaagcggagacacgatgttcacaggagatgtagcccacaacgtaccactaccaat
gatctcacccatgcacaagaagaggagataatgtccctccaaatgaagcacactgacttg
gatcatgaatgtgagtccatccatccacatgaggtggttcttaggaccgcctgtccccca
gactacacgctagctatgagaaggtctcctgatgatatccccttaatgacgcccaacacc
atcacaatgatccccaacactataccagggattcagcccctacacacattcaacacattt
accggaggacagaacaatactctgccccatcctcatccccacccccattcacactcaaca
accagggtatag
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