Corvus cornix (hooded crow): 104688091
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Entry
104688091 CDS
T03546
Symbol
DHX36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104688091 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104688091 (DHX36)
03012 Translation factors [BR:
ccw03012
]
104688091 (DHX36)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104688091 (DHX36)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104688091 (DHX36)
Translation factors [BR:
ccw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104688091 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
AAA_22
HA2_N
nSTAND3
AAA_19
ATPase
NPHP3_N
Sir1
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
104688091
NCBI-ProteinID:
XP_020440037
LinkDB
All DBs
Position
9:complement(848658..864700)
Genome browser
AA seq
983 aa
AA seq
DB search
MSYEHRRDWGRGRGRGRGGDGGSASAASSSAGGPGGXGRHPGHLRGREIGLWYARKQGQK
NRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPTPEQPAKVKP
DAEKAPVRQRPALEKTSLDWDVEYLCEKNEQDADLDERLKEDLMKKRSDPKYIEMQRFRE
KLPSYGMREELVKLINNNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPR
RISAISVAERVAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRQDLKVILMSATLNAEKFSEYFDHCPMIH
IPGFTFPVVEYLLEDVIEKLRYTPEKMDRRLHWRKGFMQGHVSRPEKEEKEEIYRQQWPG
YLRQLQGRYSASTIDALEMMDDDKVDLDLVAALIKHIVLEEEDGAILVFLPGWDNISTLH
ELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTAPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMTAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARR
KELSKNSKSDHLTVVNAFTGWEEARRCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAEHL
LAAGFVNSRDPKNPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
SVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKEQ
DTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVDWNDIKSRDTAVLTAIID
LITTQENEGVRNFAPRFQGERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgccgcgactggggccgcggccgaggccggggccgcggcggcgat
ggcggctctgcctccgccgcttcctcctcggcgggcgggcccggcgggncgggacggcac
cccggccacctgaggggccgcgagatcgggctgtggtacgcgcgcaagcagggccagaag
aaccgggacgcggaccggcagcagagagctgttgtgcgcatggatgagcgcagggaagag
caaatcgtgcagctgctgaattctgtccagactaaaaacgacaaagagcaagaagccatg
tcctggtggtctggagatgaagaaggccctactccagaacagcctgccaaagtgaaacca
gatgctgaaaaagctcctgtaagacagagaccagccttggaaaaaacatccctggattgg
gatgtggaatatctctgtgaaaaaaatgagcaggatgctgatttagatgagcggcttaaa
gaagacttaatgaagaagagatctgatcccaaatatattgaaatgcagagattccgagag
aaactcccctcatacgggatgagagaggagcttgtgaagctgatcaacaacaaccgtgtg
acggtgatcagcggcgagacaggctgcgggaagaccacgcaggtgacgcagttcatcctg
gacgatcacatcgagcgcggcctgggctccacgtgcaggatcgtgtgcacccagccccgc
aggatcagcgccatctccgtggctgagagggtggctgctgagagggcagagagctgtggc
aatggcaggagcacgggctaccagatccgcctgcagagtcggttgccaaggaaacaaggt
tcgattttgtactgtaccacgggaattgtcctgcagtggctccagtcagataagcacttg
tccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatcttcagtcagatgtt
ttaatgagcattattaaagatcttctgaatgttcgacaggatctaaaagtcatactgatg
agtgctactttaaatgcagagaagttttctgagtactttgaccattgcccaatgattcac
atccctgggttcactttcccggtggtggaatatctgctcgaagatgtcattgagaagttg
aggtacaccccggaaaagatggaccgtcggctgcactggaggaagggcttcatgcagggc
cacgtgagcaggccagagaaggaggagaaggaggagatctacaggcagcagtggccaggc
tacctaaggcagctgcagggcaggtattcagcaagtacaattgatgctctggaaatgatg
gatgatgacaaggtggacctggaccttgtagcagccctgatcaaacacattgtgctggaa
gaggaggatggtgcaattctggtgtttctgccaggctgggataacatcagcactttgcat
gagctcttgatgtcacaagtcatgtttaagtcagataggtttattatcatacctttgcat
tcattgatgcctactgttaaccagactcaggtgttcaagaagaccgcgccaggagtgagg
aaaatcgtgattgcaaccaacattgcagagaccagcattacaatcgatgacgtcgtgttc
gttatagatggggggaaaataaaggagactcactttgacacccagaacaacatcagcacc
atgacagcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagcaggaaga
gttcagccaggccactgttatcatctgtacaacggactgcgtgccagccttctggatgat
tatcagttaccagagatcctgaggacacctttggaagaactctgcttacaaatcaagatc
ctgaagcttggtggaattgcctattttctgagcaaactgatggaccccccgtctcgtgat
gctgtgatgttggccataaatcacctcatggagctgaacgctctggacaggcaggaggag
ctgactcccctgggtgtccacctggcacggctgcctgtggagccgcacatcgggaagatg
atcctgtttggagccttgttctgctgcctggaccctgtgctgaccattgcagccagcctc
agcttcaaggacccttttgtcatccctctgggcaaagagaaagttgcagatgcaagaaga
aaggagctgtcgaagaactcaaaaagcgaccatctgactgtggtgaatgctttcactggc
tgggaagaggctcggcgttgcggtttcaggaatgagaaggactattgctgggaatatttc
ttgtcctcaaataccatgcagatgctgcataacatgaaagggcagtttgctgagcatctc
cttgcagctggatttgtgaatagcagagaccccaagaatcccaaatctaacaccaactca
ggtaatgagaagctgctcaaagcagtcatctgtgctggcctctatcccaaagtggcaaag
atccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatgga
tcagttaatatccatcccaaatcggtgaacgtggaggaaacagagttccattataactgg
ctcgtgtaccatttgaagatgagaaccagcagtatttacctgtatgattgtacagaagtg
tctccatactgcctcttgttctttggaggggatatatccattcagaaggataaggagcag
gacaccattgctgtggatgagtggattgttttccagtctccagcaagaatagcacacttg
gtcaagaatttgagacaagaactcgatgatcttctacaagaaaaaattgaaaacccccat
cccgtggactggaatgatattaaatccagggatacagcagtgctgacagctattatagac
ttaatcaccacgcaggagaacgagggcgtcaggaacttcgcgccgcggttccagggcgag
cgctacagctga
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