KEGG   Corvus cornix (hooded crow): 104688227
Entry
104688227         CDS       T03546                                 
Symbol
NELFB
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104688227 (NELFB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccw03021]
    104688227 (NELFB)
Transcription machinery [BR:ccw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     104688227 (NELFB)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 104688227
NCBI-ProteinID: XP_010395909
LinkDB
Position
17:complement(9401092..9411379)
AA seq 577 aa
MYAGLQELGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQYALPFLDLHGTPRLE
FHQSVFDELREKLLERVSAIALEGKVEERYKKLEDLLEKSFSLVKMPSIQPVVMCVMKHL
PKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKENILFSND
ISFLQNFFSPSPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAE
LLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRARELQGFLDGVKKGQEQVLGD
LSMILCDPFAINTLALSTIRHLQDLVGQDTLPRESPDLLLLLRMLSLGQGAWDMIDSQVF
KEPKMEAELITRFLPLLMSFVVDDHTFTVDQKLPSEEKGPIPYPSTIPEAFTKFLQENRI
ACEIGLYYILHITKQRNKNAFLRLLPALVETFSDLAFSDIFLHLLTGNLTLLSDEFALEE
FCTSLFDGFFLTACSRKENVHRHVLRLLLHLHHKVAPTKLESLQKALEPTKQSGEAVKEL
YNQLGEKLELRKPSPAEVTETPSMELPLPTVPTPASR
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtacgcggggctgcaggagctgggagtggccaatggcgaggacctcaaggagaccctc
acgaactgcacggagccgctgaaggccatcgagcagttccagacggagaacggggtgctg
ctgccctcgctgcagtatgccctgcccttcctggacctgcacggcaccccccgactcgag
ttccaccagtccgtgttcgatgagctgcgggagaagctgctggagagggtctctgccatc
gccttggaggggaaggtcgaggagagatacaagaagctggaagatctgctagagaagagc
ttttccctggtcaagatgccctccatacagcccgtggtcatgtgtgtcatgaagcacttg
cccaaggtccctgagaagaagctgaagctggtgatggctgataaggacctgtacaaggcc
tgtgctgtggaggtgaagagacagatctggcaggacaaccaggctctctttggggatgag
gtgtcacccctgctgaagcaatacatcctggagaaggagaacattctcttcagcaatgat
atttccttcctgcaaaatttcttcagtccatctcccaaaacgaggcgtcaaggagaggtg
gtgcagaagctgacccagatgattgggaagaacgtgaagctctatgatatggtgctgcag
ttcctgaggacgttgttccttcgcaccaggaatgtccattactgcacgctgagggcagag
ctcctcatgtcactgcatgacctggagatcagtgagatctgcactgttgacccctgtcac
aagttcacctggtgcctcgacgcctgcattcgggagaagttcgtggacaacaagagagct
cgggaattgcaaggattcctggatggagtgaagaaaggacaagaacaggtgttgggggac
ttatcaatgatcctgtgtgatccctttgccatcaacaccttagccctgagcaccataagg
cacctgcaagacctcgttgggcaggacaccttacccagggaaagcccagatctgctgctg
ctccttaggatgctgtctttgggacagggggcctgggacatgattgacagccaagtcttc
aaggaaccaaaaatggaagctgagctgatcaccaggttcctgcccctgctgatgtccttt
gtggtggatgaccacaccttcactgtggatcagaagctgccttcggaggagaagggacca
atcccctaccccagcaccattcccgaggctttcaccaagttcctgcaggagaacagaata
gcctgtgagattgggctgtattacatccttcacatcaccaaacagaggaacaagaatgct
ttccttaggctcctgccagcactagttgagacattcagtgacttggccttcagtgacatt
ttcctgcatctgctcactggtaacctcaccctgctcagtgatgagtttgcacttgaggag
ttctgcaccagtctctttgatggcttcttcctcactgcctgctccaggaaggagaatgtg
cacagacacgtgctcaggctgctgctccatctgcatcacaaagtggccccaaccaaacta
gagtctctccagaaggctttggagcccaccaagcagagtggggaagctgtgaaggagctt
tacaaccaactcggtgagaaactggagctccgcaagcccagcccggctgaagtgactgag
actccctccatggagctgcccctgcccaccgtgcccactccagcctcacgctga

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