Corvus cornix (hooded crow): 104688240 Help Entry 104688240         CDS       T03546                                  Symbol TNC Name (RefSeq) tenascin isoform X2   KO K06252   tenascin Organism ccw  Corvus cornix (hooded crow) Pathway ccw04510   Focal adhesion ccw04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:ccw00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104688240 (TNC)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104688240 (TNC)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccw00536]     104688240 (TNC) Glycosaminoglycan binding proteins [BR:ccw00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104688240 (TNC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN Fibrinogen_C EGF_Teneurin EGF_2 EGF_Tenascin Ig_DSCAM-DSCAML_C Fn3_Dep-1_2nd Pur_ac_phosph_N EGF Interfer-bind NDNF hEGF Big_5 Motif Other DBs NCBI-GeneID:  104688240 NCBI-ProteinID:  XP_020440071 LinkDB All DBs Position 17:8446682..8518708 Genome browser AA seq 1776 aa AA seqDB search MGLPSWVLACAILALLSQHVTGGLIKRIIRQKRETGLNVTLPEDNQPVVFNHVYNIKLPV GSLCSVDLDTASGDADLKAEIEPIKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGHGNYSIEICGCVCEP GWKGPNCSQASCPSDCNDQGKCVDGLCVCFEGYTGPDCSQELCAQGCGTHGRCVGGRCLC HEGFVGEDCSVPLCPHNCHGRGRCVDSECVCDEGYTGEDCSELICPNDCYDRGRCVNGTC FCEEGFTGEDCGELTCPNNCHGNGRCENGLCVCYEGFVGDDCGQLRCPNDCHNRGRCVGG RCVCHEGYLGEDCAELRCPNDCHNRGRCENGQCVCHEGFIGEDCGELRCPNDCHSRGRCE NGQCVCHEGFTGDDCGQLRCPSDCHNRGLCVNGQCVCDEGYTGEDCAELRCPHDCHNRGR CVEGQCKCDNGFTGEDCGELACPNDCHGRGRCVDGRCVCHEGFVGEDCRERSCPSDCHNA GRCVDGRCVCEDGYIGDDCSDVSPPTELTVTNVTDKTVNLEWKHENLVNEYLVTYVPTSS GGLDMQFTVPGNHTAATIHELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLKFK SVRETSVQVEWDPLNFSFDGWELVFHNMKKDDNGDITSSLKRPETSYMQPGLAPGQQYNV SIHIVKNNTRGPGLSKVITTKLDAPSQVEAKDVTDTTALITWSKPLAEVEGIQLTYGPKD IPGDRTTIDLSEDENQYSIGNLRPHTEYEVTLVSRRGDMESDPVKEVFVTDLDAPRNLKR VSQTDSSITLEWKNSHANVDNYRIKFAPISGGDHVEITVPKGSQATTRATLTGLRPGTEY GIGVTAVRNDRESAPATINAGTDLDNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLVYTG PSGKKSEVEVPVDSTSFLLRGLDAGTEYTISLQAEKGRHKSKPTTVKGSTEEEPELGGLS VSKTGWDGFQLTWTAADGAFENFIIQVQESGNPEETRNVTVPGALSSVNVTGLKANTPYN ITLQGVTRGYRTKPLSLETTTGEQPGVAELMVSDITPESFNLSWTASNGDFDIFTIEIID SNRLLEPMEFNVSGNSRTAHISGLSPSTDFIVYLSGISRGFRTQAISAAATTEAEPEVDN LLVSDATPDGFRLSWTADDGVFNSFVLKIRDTKRKSDPLELIVPGHERTQDITGLKEGTE YEIELYGISSGQRSQPVNAVASTVVGSPKGISFSDITENAATVSWTPPHSRVENFRISYV PVTGGTPNVVTVDGSKTRTKLVKLVPGVDYNVSIISVKGFEESEPVSGTLKTALDSPSGL VVVNITDSEALATWQPAIAAVDNYVVSYSSEEEPEVTQMVSGNTVEYDLKGLQPATEYTL SVHALKDTQRSETLSTHFTTGLDAPRDLSATEVQSEAAGISWRPPRAPVTGYLLIYESID GRVKELILNPETTSYSLTELSPSTQYTVKLHALSGALRSKTIQTIFTTTGLLYPYPKDCS QALLNGEATSGLYTIYLNGDKAQPLQVFCDMGEDGGGWIVFLRRQNGKQDFYKNWNTYVT GFGDPKDEFWIGLENLHKITSQGQYELRVDLRDKGDAAYAVYDRFSVGDAKSRYRLRVDG YSGTAGDSMTYHNGRSFSTFDKDHDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQ GVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA NT seq 5331 nt NT seq  +upstreamnt  +downstreamnt atgggactccccagctgggtcttggcctgcgccatcctcgctttgctgtcccagcacgtc actgggggactcatcaagagaattatcaggcagaagagggagactgggctgaacgtgacc ttgccagaggacaaccagcctgtggtttttaaccacgtctacaacattaagctgcccgtt ggctccctctgctctgtggacctggacacggcgagcggcgacgctgacctgaaggcggaa attgagcccatcaagaactacgaggagcacacggtgaatgaggggaaccagattgtcttc actcacaggattaacattccccgccgggcttgtggctgtgcagctgccccagacattaag gatctgctgagcagactagaggagctggaggggctggtctcctccctgagggagcagtgt gccagcggggctggatgctgtcctaattcccaggcagtagaaggtcgcctggacaccaca ccctattgcagcgggcacggcaactacagcatcgagatctgcggctgcgtctgcgagccg ggctggaagggccccaactgcagccaggcctcgtgtccctccgactgcaacgaccagggc aagtgcgtggacgggctgtgcgtgtgcttcgagggctacacgggcccggactgcagccag gagctctgcgcccagggctgcggtacccacgggcgctgcgtgggcgggcgctgcctgtgc cacgagggctttgtgggtgaggactgcagcgtgcccctgtgcccccacaactgccacggc cgcgggcgctgcgtggacagcgagtgcgtgtgcgacgagggctacaccggcgaggactgc agcgagctcatctgccccaacgactgctacgaccgcgggcgctgcgtgaacggcacctgc ttctgcgaggaggggttcaccggcgaggactgcggggagctcacctgccccaacaactgc cacggcaacgggcgctgcgagaacgggctgtgcgtgtgctacgaggggtttgtgggcgac gactgtggccagctgcggtgtcccaacgattgccacaaccgcgggcgctgcgtgggcggg cgctgcgtgtgccacgaggggtacctgggcgaggactgtgcggagctgcggtgtcccaac gattgccacaaccgcgggcgctgcgagaacgggcagtgcgtgtgccacgagggcttcatc ggagaggactgcggggagctgcgctgccccaacgactgccacagccgtgggcgctgcgag aacgggcagtgcgtgtgccacgagggcttcaccggggacgactgcggccagctgcggtgc cccagcgactgccacaaccgcgggctgtgcgtcaacgggcagtgcgtgtgcgatgagggg tacacgggcgaggactgtgcggagctgcgctgcccccacgactgccacaaccgtgggcgc tgcgtggagggacagtgcaagtgtgacaatggcttcacaggagaggactgcggagagctg gcctgccccaacgactgccacgggcgtgggcgctgcgttgacgggcgctgcgtgtgccac gagggcttcgtgggcgaggactgccgggagcgctcctgccccagcgactgccacaacgcg gggcgctgcgtggacgggcgctgtgtctgcgaggatgggtacatcggggacgactgctct gatgtgtctcctccaactgagctgactgtgaccaacgtgacggataaaactgtcaatctg gagtggaagcatgagaacctcgtcaatgagtacctcgtcacctacgtccccaccagcagt gggggcttggacatgcagttcaccgtgccaggaaaccacacagccgccaccatccatgag ctggagccgggggtggagtacttcatccgtgtctttgcaatccttaaaaacaagaagagc attccagtcagcgccagggtagccacatatctgcctgctccagaaggtctgaaattcaaa tctgttcgggaaacatccgtccaggtggagtgggaccctctgaacttttcttttgatggc tgggagctggtcttccataatatgaaaaaggatgataatggtgacataaccagcagcttg aaaaggccagagacatcctacatgcagccaggtttggcacctgggcaacagtacaatgtg tccatccatatagtgaagaacaacaccagaggaccaggactgtccaaagtcatcaccaca aagcttgatgcccccagccaggtggaggccaaagatgtcaccgacaccaccgctctcatc acgtggtccaaacccttggctgaagttgagggcatacagctcacctatggccccaaggac attccaggggacaggacaaccatcgacctctctgaagacgagaaccaatattccattggg aacctgaggccgcacacagagtatgaggtgacgctcgtctctcgtcgaggggacatggaa agcgaccctgtgaaggaagtctttgtcacagacctggatgctccaaggaacctgaagcgg gtgtcccagaccgacagcagtatcaccttggagtggaagaacagccacgccaatgtcgat aattaccgaattaagtttgcccccatctctggtggggaccacgtggagatcacggtgccc aagggcagccaggccacaaccagagctacactcacaggtttgaggcctggaactgaatat ggcattggagtgacagcagtgaggaacgacagggaaagtgctcctgctaccatcaatgct ggcactgatctcgataaccccaaggacttggaagtcagcgaccccactgaaaccaccttg tcccttcgctggagaaggccagtggccaagtttgaccggtaccgcctcgtttacaccggt ccctccgggaagaagagcgaggtggaggttcctgtggacagcacctccttcctgctgcgg gggctggatgcaggcacggagtacaccatcagcctgcaggcagagaagggcaggcacaag agcaaacctaccactgtcaagggttccacggaggaggaacctgagctgggaggattatca gtatcaaagactggctgggatggtttccagctcacctggacagcagccgacggggccttt gagaactttatcattcaggtgcaggagtctggcaaccccgaagaaacccgaaatgtcaca gtcccgggggcactgagctctgtgaatgtcaccggcctcaaggccaacactccttataac atcacccttcagggggtcactcggggctacaggaccaagcccctttctcttgagaccacc acaggagagcagcccggcgtcgctgagctaatggtttccgacattactcccgaaagcttc aacctctcctggacagcctccaacggggactttgacatctttaccattgaaattattgat tctaacaggttgctggagcccatggagttcaatgtctcaggcaactcaaggactgctcat atctcagggctttctcccagcactgatttcattgtctacctctccgggatctctcgcggg ttccgcacacaggcaatcagtgctgcagctaccacagaagcagaacccgaggtcgacaac cttctggtttcagacgccactccagacggattccgtctctcctggactgcagatgacggg gttttcaacagctttgttctaaaaatcagggacaccaaaaggaaatctgacccactggag ctgatagtgccaggccatgagcgcacccaggacataacagggctgaaagagggcactgaa tatgagattgagctctatggaattagcagtggacaacgttcccagcccgtaaatgcagta gcatccacagtcgttggctctcccaagggaatttctttctctgacatcacggaaaacgcc gccacagtcagctggaccccccctcactcccgtgtggaaaacttccggatctcctacgtc cccgtcacgggaggtactccaaatgttgtcacagtcgacgggagcaagacaaggaccaag ctggtgaagttggtcccaggtgtggactacaatgtcagcatcatctctgtgaaaggcttt gaggaaagtgagcccgtctctggcaccctgaaaacagctttggacagcccgtcaggcctg gtagtggtgaacatcacagactcagaggctctggcaacctggcagccagcaattgcagct gtggataactatgtggtgtcctactcttctgaggaagagccagaggtgactcagatggtc tcagggaacaccgtggagtatgacctgaaggggctccagcctgccaccgagtacacgctg agcgtccacgcgctgaaggacacgcagaggagcgagaccctctccacccacttcaccaca gggctggatgctccaagagatttgagtgccactgaggtgcagtcagaagcagctgggata agctggaggcctccccgtgctccagtcactggatatcttctgatctatgaatccattgat ggcagagtaaaggaactcatcctaaaccccgagacaacatcctacagcctgacagagctg agcccctccacccagtacacagtgaaactgcacgccctgagtggagccctgaggagcaaa accatccagaccattttcaccacaactgggctcctctatccctaccccaaggactgctcc caggccctcctgaatggagaagccacctctgggctctacacaatttacctgaacggggac aaggctcagcctctgcaagtgttctgtgacatgggcgaggacgggggaggatggatcgtg ttcctgaggcgtcagaatggaaagcaagatttctacaagaactggaatacttacgtgaca gggtttggagatcctaaggatgaattctggataggtctggagaacctgcacaaaatcact tctcagggccagtacgagctgcgggtggatctgagggacaagggggacgcggcctacgcc gtgtacgaccgcttcagcgtcggagacgccaagagccggtaccggctgcgggtggatggc tacagcggcacagcaggtgactccatgacctaccacaatggaaggtccttctccaccttc gacaaggaccatgactctgccatcaccaactgtgctctgtcgtacaaaggagctttctgg tacaagaactgtcaccgagtcaacctgatgggcagatatggtgacaacagccacagtcag ggcgtcaactggttccactggaagggccacgagtattccatccagtttgcagagatgaag ctgagaccctccagcttccggaacctggaagggcgccggaagcgagcgtag

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