Corvus cornix (hooded crow): 104688274
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Entry
104688274 CDS
T03546
Symbol
SPTAN1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04210
Apoptosis
ccw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104688274 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104688274 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccw04812
]
104688274 (SPTAN1)
Cytoskeleton proteins [BR:
ccw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104688274 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
104688274 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
Vip3A_N
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
104688274
NCBI-ProteinID:
XP_010396002
LinkDB
All DBs
Position
17:complement(5710205..5756525)
Genome browser
AA seq
2510 aa
AA seq
DB search
MLSSFRKVKVQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSSLRRQKLEDSYRFQF
FQRDADELEKWIQEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANSGAIIKLDETGNQ
MINEGHFASETIRTRLQELHRLWELLMEKMREKGVKLLQAQKLVQYLRECEDVLDWINDK
EAIVTSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAGKLIQEQHPEEELIKS
KQDEVNASWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKGQLMASDDFGRDLA
SVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPINASQIQVKREELIANWEQIRT
LAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKG
EIDAHEDSFKSADESGQALLSAGHYASDEVKEKLTILSDERSALLELWELRRQQYEQCMD
LQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDE
FATKLIQNNHYAMDDVATRRDALLSRRNALHERAMYRRAQLADSFHLQQFFRDSDELKSW
VNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVKHYASDE
VAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGK
DLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIKKKQEALVARYEA
LKEPMVARKQKLADSLRLQQLFRDIEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQA
LQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKIKLNELNQKWDSLKAKASQRRQDLED
SLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQA
LREQAQSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE
VNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIALRQEQIDNQTLITKEVGSVSLRMKQ
VEELYHSLLELGEKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEV
LQKKFDDFQKDLKANESRLKDINKVAKDLESEGLMADEVQAVQQQEVYGMMPRDETDSKT
ASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEW
IEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAE
DLQEKCTELNQAWNSLGKRADQRKEKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELA
KDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERT
DLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHE
DFDKAINVQEEKIAVLQSFADQLIAADHYAKGVIANRRNEVLDRWLRLKAQMIEKRSKLG
ESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANA
DRIRGVIDMGNSLIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNF
NTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADS
LMTSSAFDTSQVKDKRETINGRFQRIKGMASARRAKLNESHRLHQFFRDMDDEESWIKEK
KLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQ
RLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLA
AIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHEANITAKMKGLRGKVSDLEK
AAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDA
GLQAFQQEGIANITALKDQLLAAKHIQSKAIEARHASLMKRWNQLLANSATRKKKLLEAQ
EHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSA
QADFNQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEEN
DKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVYQYEVGDDLSGRSCMVEESGTLE
SQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGM
RMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMV
EEGEPDPEFESILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKP
YVTKEELYQNLTREQADYCISHMKPYMDGKGRELPSAYDYIEFTRSLFVN
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcatcgtttcgtaaagtcaaagtccagaaaatggatccaagtggtgtaaaagtg
ttggaaacagcagaagatatccaagaaaggcgtcagcaagttttggaccgttaccacagg
ttcaaggaactctcttctctgaggcgccaaaaacttgaagattcctatcgattccagttt
ttccagcgtgatgcagatgagcttgaaaaatggatccaagagaaactgcagattgcatct
gatgaaaattacaaagacccaagcaatttgcaggggaagctgcagaagcaccaagccttt
gaagctgaggtgcaggccaattcaggagccatcattaaattggatgagactggaaatcag
atgataaatgaaggccattttgcatctgaaaccataagaactcgactgcaggagctgcac
cgactatgggaattactgatggaaaagatgagagagaagggagtcaaattattgcaagca
cagaagttggtgcaatatttacgggaatgtgaagatgtcttggactggatcaatgataag
gaagcaatagtgacctcagaagagcttggacaggacttagagcatgttgaagttttgcaa
aagaagtttgaagagttccagacagaccttgcagctcatgaagaaagagtaaatgaagtg
aaccaatttgctggcaaacttatccaggaacaacaccctgaagaggaactgataaagtcc
aaacaggatgaagtaaatgcaagctggcagcgtcttaagggacttgcccttcagaggcaa
ggaaagctctttggggcagctgaagtgcagcgtttcaacagggatgtggatgaaacaatc
agctggattaaggagaaagggcagttgatggcctcagatgattttggcagagacttagcc
agtgtccaggcattactgcgcaagcacgaaggcctggaaagagacctggcagctctggaa
gataaggtgaaggccctgtgtgcagaagctgaccgtttgcagcagtctcacccaataaat
gcttcccaaattcaagtgaaacgggaggaactcattgccaactgggaacagatccggacg
ctggcagcagagaggcatgctcgtctcaacgattcctacaggctgcagcgctttctcgca
gacttccgagacctcaccagctgggtgactgagatgaaggctctgataaatgctgatgaa
cttgccaatgatgtggctggggcagaagctcttctagacagacatcaggaacataaggga
gaaattgatgcccatgaagacagcttcaaatctgctgatgagtcaggccaggctttgctc
tctgctgggcactacgcttctgatgaagttaaagaaaagctgaccatcctctcagatgaa
aggtctgccttgctggaactgtgggagctccgcagacagcagtatgagcagtgcatggac
ctgcagcttttctacagagatactgaacaagttgacaactggatgagcaaacaagaggca
tttctgctgaatgaagaccttggtgattctctggacagtgtggaggctcttctgaagaag
catgaagactttgagaaatccctaagtgcccaagaggagaaaatcacagcattagatgag
tttgctactaagttgattcagaataaccactatgccatggacgatgttgctacacgcaga
gatgctctgctaagccgccgaaatgcccttcatgaaagagccatgtaccgccgtgctcag
ctggcagattctttccatctgcagcagtttttccgagattctgatgagctcaagagttgg
gttaatgaaaagatgaaaactgcaactgatgaggcctacaaggatccatcaaacttgcaa
ggtaaagttcagaaacaccaggcttttgaagcagagctgtctgctaaccagagtcgtatt
gatgccctggagaaagctggccagaagctgattgatgtcaagcactatgcgtcagatgag
gtggcagctcgcatgaatgaagtcatcagcttgtggaagaagcttctggaggccactgag
ctcaaaggtataaaactgcgagaagccaatcagcagcagcagtttaatcgcaatgtggag
gacattgagctctggctgtatgaagtagaaggacacttagcttctgatgattatggaaaa
gatcttactaatgttcagaatctccagaagaaacatgccctgctagaggcagatgttgct
gcccatcaggatcggatagatggcattaccatccaggcacgccagttccaagaggctggg
cactttgatgctgacaatatcaagaagaaacaagaagctttagtggctcgctatgaagct
ctgaaggagcccatggtagctcgcaagcagaaactcgcagattctcttcgcctgcagcag
cttttccgtgacattgaggatgaagagacctggattagggaaaaagaacctattgcagct
tcaacaaaccgaggcaaggacttaattggtgtccagaatctgctaaagaagcaccaggct
ttgcaggcagaaattgcaggccatgagcctcgcattaaagcagtcacacagaaggggaat
gctatggtggaagaaggacactttgcagctgaagatgtgaaaatcaaactgaacgagcta
aaccagaagtgggactctctgaaagccaaagcatctcagcgtcgacaggatctggaggat
tccctgcaggctcagcagtactttgctgatgctaatgaggccgaatcctggatgagggaa
aaggagcccattgtaggcagtacagactatgggaaagatgaagactctgctgaggctctt
ctgaagaaacatgaagctttgatgtctgatctctccgcttatggcagcagcatccaggca
ttaagggaacaggcccaatcgtgcaggcaacaagttgctcccacagatgatgaaactgga
aaagagctcgttctggctctctatgattaccaggagaagagtccccgggaggtgacaatg
aagaagggagatatcctcaccttactcaacagcaccaacaaggactggtggaaggtggaa
gtcaatgaccgtcagggatttgtaccagctgcctatgtgaaaaaactggatcctgcccag
tctgcatctcgagagaacctcctggaggagcaaggcagcatagcactgcgacaggagcaa
atcgacaaccagactctcataactaaggaggtcggcagtgtatctctgcgtatgaaacag
gtcgaagaactgtatcactctctcctggaactgggagaaaaacgtaaaggaatgttggaa
aaaagctgcaagaagttcatgcttttccgtgaagccaacgagctccagcagtggatcaat
gagaaggaagcagcactcaccagtgaggaagtgggtgctgacctggagcaggtggaggtg
ctgcagaagaaatttgatgattttcagaaggatctgaaagccaacgagtcacgcctgaag
gacataaacaaggttgcaaaggacctggagtcagaagggctgatggcagatgaagtacaa
gcagtacagcaacaggaagtctatgggatgatgcccagggatgaaactgattctaagaca
gcgtctccttggaagtctgcacgtttgatggtacacactgtggcaaccttcaactcaatc
aaggagctgaatgagcgctggagatctctgcagcagctggcagaagagaggagccagttg
ttgggcagtgcccacgaggtccagagattccacagagatgctgatgaaaccaaagaatgg
atagaggagaagaatcaagcattaaatacagacaactatgggcatgacctagccagtgtt
caggctctgcagcgcaaacatgaaggctttgagagagacttggcagctctgggagacaag
gtgaattctcttggtgaaactgcccagcgtctgatccagtcacatccagaatctgctgaa
gatctccaagaaaaatgcactgagttgaatcaggcttggaatagtctgggaaaacgtgct
gaccagcgcaaagagaagcttggagattctcatgacctgcagcgtttcctcagtgatttc
agggacctcatgtcttggatcaatggaatccggggtctggtctcctcagatgaactcgca
aaggatgtgactggagctgaggctttattggaaaggcaccaggaacaccgcacggaaata
gatgcaagggctggcactttccaggcatttgaacagtttggacaacaacttctagcccat
ggacactatgctagcccagagatcaaggagaaactggatattctggaccaagaacggaca
gacctggagaaggcctgggtccagcgcagaatgatgctggaccagtgcctggaactacag
ctgtttcatcgggactgtgaacaagctgaaaactggatggctgcccgggaggctttccta
aatacagaggataaaggagactccttagacagtgtggaggcactcatcaagaaacatgaa
gattttgataaagcaatcaatgtccaggaagagaaaattgctgtcctgcaatcctttgct
gaccagctgattgctgcagatcattacgccaagggagtcatcgccaacagacgcaacgag
gtcctggacaggtggcttcgtctgaaagcccaaatgattgagaagagatcaaagctggga
gagtctcagaccctccagcagttcagtcgtgatgtggatgaaatagaagcctggatcagt
gaaaagctccagactgcaagtgatgagtcatataaggatcccacaaatatccagctttcc
aaactgctgagcaaacaccagaagcaccaggcctttgaagccgagctccacgccaacgct
gaccgcatccgtggcgtcattgacatgggcaactccctcatcgagaggggcgcctgtgct
ggcagcgaggacgccgtcaaggcacgcctggctgccctggctgaccagtggcaattcctg
gtacagaaatcagcagagaagagtcagaaactgaaagaagctaataagcaacagaatttc
aatactggaatcaaggactttgacttttggctttcagaggtggaggctttgttggcatct
gaagactatgggaaggacttggcatctgttaacaaccttttgaagaaacaccagttactg
gaagctgatatatctgctcatgaggaccgcctgaaggacctgaacagccaggctgacagt
ctgatgaccagcagtgcctttgacacatcccaagtgaaagacaaacgtgagaccatcaat
gggcgcttccagcgcatcaagggcatggccagcgcccgccgtgccaagctcaacgagagc
caccgcctgcaccagttcttccgtgacatggacgacgaggagtcctggatcaaagagaag
aaactgttggttagctcagaggactatggcagagacctgactggtgtgcagaatctgagg
aaaaaacacaagcgcttagaagcagaattggctgcccacgaacctgctatccagggtgtt
ctggacacggggaagaagctttcagatgacaacacaattggaaaggaggagatacagcag
agactggctcagtttgtggatcactggaaggagttaaaacagttggcagctgctaggggt
cagcgtctggaggagtctctggagtatcagcaatttgtagcaaatgttgaggaagaagaa
gcctggatcaatgagaaaatgacactggtagccagcgaggattatggggacacacttgct
gctatccagggcttgctgaagaagcacgaggcattcgagactgattttactgtccacaag
gacagagtgaacgatgtctgtgctaatggagaggatctcattaaaaagaacaatcaccac
gaggcgaacatcactgccaagatgaaggggctcagaggcaaggtgtcagatctggagaaa
gcagcagctcagaggaaagccaaactggatgagaactcagccttcctccagttcaactgg
aaagcagatgtggtggagtcatggataggggagaaggaaaacagtctgaagacagatgat
tatggacgtgacctctcttcagtgcaaaccttgctcaccaaacaggaaacgtttgatgct
ggacttcaggctttccagcaggagggaattgcaaacatcactgctctgaaagaccagctg
ctcgcagccaagcacatccagtccaaggccatcgaggcccggcatgcttccttgatgaaa
cgctggaatcagctactggctaattctgctaccaggaaaaagaaactcttggaggctcag
gagcacttcagaaaagttgaggatctgttcctgacctttgcgaagaaggcctctgccttc
aacagttggtttgagaatgctgaggaggacctgacggatcctgtgcgctgcaactcactg
gaagaaatcaaagccctgagagaagctcacgacgctttccgttcctccctaagttctgcc
caagctgatttcaaccagctggcagagctcgatcgccagatcaagagtttccgtgtggcc
tccaacccctacacttggttcactatggaggctcttgaagaaacctggaggaatctgcag
aaaattatcaaggaacgtgaactggagctgcagaaggaacagcgaaggcaggaagaaaat
gacaaactgcgtcaggaatttgctcagcatgccaatgccttccatcagtggattcaggag
accaggacttacctactagatggcatagcatatcgtcgtgtcattcgtgtctatcagtat
gaagttggggatgatctatctggaagatcatgtatggtggaagaatcgggaacgttggag
tcacagctggaagctactaaacgcaagcaccaagagatccgagctatgaggagccagctg
aagaagattgaggaccttggagcagccatggaagaggcacttatcttggacaacaaatac
acagaacacagcactgtggggctggcacagcagtgggaccagctggaccagctggggatg
aggatgcaacacaacctggaacagcagatccaagcccggaacaccactggagtcaccgag
gaggccctgaaggaattcagcatgatgttcaagcactttgacaaggacaaatctggacga
cttaatcaccaggagtttaagtcttgcttgcgctctctcggctacgatctgcccatggtt
gaggaaggagagccagaccctgagtttgagtctattcttgacactgtagatcccaacagg
gatggacatgtctcgctgcaggagtacatggccttcatgattagccgggaaacggagaac
gtgaaatccagtgaggagatcgagagcgctttccgtgccctcagctccgaggggaagccc
tacgtgaccaaggaggagctctaccagaacctgacccgggaacaggctgattattgcatc
tctcacatgaaaccctacatggatggcaagggcagggaactgccttctgcctatgactac
atagaatttacacgttcactctttgtgaattga
DBGET
integrated database retrieval system
