Corvus cornix (hooded crow): 104688278
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Entry
104688278 CDS
T03546
Symbol
ZER1
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104688278 (ZER1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
104688278 (ZER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
ARM_ARMC5
ARM_LRRK2
HEAT_EZ
APC1_C
ARM_ECM29
Lentiviral_Tat
Motif
Other DBs
NCBI-GeneID:
104688278
NCBI-ProteinID:
XP_039417722
LinkDB
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Position
17:5631902..5651577
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AA seq
766 aa
AA seq
DB search
MASDSPESLMTLCTDYCLRNLEGTLCYLLDNETLRLHPDIFLPSEICDKLVNEYVELVKT
DSIFEPHESFFTLFSDPRSTRLARIHLREHIVQDQDLEAIRKQDLIELYLTNCEKLTAKS
LQTLVSFSHTLISLSLFGCCNIFYEEENPGGCEDDCLVNPTRQVLVKDFTFEGFSRLRFL
NLGRLIEGVNVETLLRPLASLAALDLSGIQLNDVGFLTQWKDSLVSLVLYNMDLSEEHIQ
VIAQLRKLRHLDISRDHLSSYYKFKLTRRVLNLFVENLVNLTSLDISGHTMLENCTIPSM
EEKMGQTSIEPAKSSIAPFRGLKRPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNAI
EAYTEHRPEITSRAINLLFDIARIERCSQLLRALQLVITALKCHKDDKNIQVTGSAALFY
LTNSEYRMEQSVKLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFSIPEELEFQYRRVNE
LLLNILNQSRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVMTMLKLIQKKLADKTC
DQVMEFSWSALWNITDETPDNCEMFLNYSGMKLFLECLKEFPEKQELHRNMLGLLGNVAE
VKELRPQLMTSQFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGICEPHREEVV
KRMWAAIQSWDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPDKYCPL
LIKEGGIPLLKDMIKMASARQETKEMARKVIEHCSNFKEENMDTSR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgacagtcccgagtcactgatgaccttgtgcaccgattactgccttcgcaac
ctggaggggactctctgctacctcctggacaacgaaacactccggctccatcccgacatc
ttcctgccaagcgagatctgtgacaaacttgtcaacgagtacgtggagctggtgaagaca
gacagcatctttgaaccccatgagagcttcttcaccctcttctcagacccacggagcacc
aggctagctcggatccacctgcgggaacacattgtgcaggaccaggacctggaggccatc
aggaagcaggatcttattgagctctacctgactaactgtgagaagctgacagccaagagc
ctgcaaaccttggtgagcttcagccacacactgatctccctgagcctctttggctgctgc
aatatcttctacgaggaggagaaccccgggggctgtgaggacgactgcctggtgaacccc
actcgccaggtcttggtcaaggacttcacttttgaaggcttcagccgcctgcgcttcctg
aacctgggccgcctgatcgagggggtaaacgtggagacactgctgcggcccttggcctcc
cttgcagctctcgacctttctgggatccagctgaatgatgtgggattcctgacccagtgg
aaggacagtctggtttccttagtgctttacaacatggacctttctgaggagcacatccaa
gtgatcgcacagcttcgcaagctcaggcacctggatatctcccgagaccatctgtccagt
tattacaagttcaagctgacccggcgggttctaaacttgtttgtggaaaacctggtgaac
ctcacttcgcttgacatctcagggcacaccatgctggagaactgcactatccccagcatg
gaggagaagatgggccagacaagcattgagccagcaaagagcagcattgctcccttccgg
ggtctgaaacgaccactccagttcttgggcctttttgaaacatccctctgccgcctgacc
catattccagcctacaaggtgagtggagacaagaacgaagagcaagtcctgaatgctatt
gaggcttacaccgagcaccggccggaaatcacttcccgggccatcaacctgcttttcgac
attgcccgcatcgagcgctgcagccagctgctgagagccctccagctggtgatcacagcc
ctcaagtgccacaaggatgacaaaaacatccaggtgacgggcagcgcggcactgttctac
ttgaccaactccgagtaccgcatggagcagagcgtgaagctgcggcgccaggtcatccag
gtggtgctgaacggcatggagtcctaccaggaggtcacagtacagcggaactgctgcctg
acactgtgtaacttcagcattcccgaggagctggagttccagtaccgccgagtgaacgag
ctgctgctgaacattctcaaccagagccggcaggacgagtccatccagcgcatcgctgtg
cacctctgcaatgccctggtctgccaggtggacaatgaccacaaagaagctgtgggcaag
atggggtttgtcatgacaatgctaaagttgattcagaagaagttggctgataaaacgtgt
gatcaggtgatggagttctcctggagtgccctctggaacatcactgatgagaccccagat
aactgcgagatgttccttaactacagtggcatgaaactgttcttggagtgcttgaaagag
ttcccagagaaacaggagctacaccgcaacatgctgggcctcctgggcaatgtggcagag
gtgaaggagctccgcccacagctcatgacctcccagttcatcagtgtgttcagcaacctc
ctggagagcaaagctgatgggattgaggtgtcttataatgcctgtggagtgctctcccat
atcatgtttgatggtccagaggcctgggggatctgtgagcctcacagagaggaggttgtg
aagaggatgtgggcagccatccagagctgggatatcaactccaggagaaatatcaattac
aggtcatttgaaccaatccttcgacttcttccacaagggatctccccagtcagccagcac
tgggccacctgggcactctataacctggtctctgtctaccctgacaagtactgcccactg
ctgatcaaagaaggtgggattcctctcctgaaggacatgattaaaatggcctcagcacga
caagagaccaaggaaatggcccggaaagttatagagcactgcagtaactttaaggaggag
aacatggacacttccagatag
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