Corvus cornix (hooded crow): 104688313
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Entry
104688313 CDS
T03546
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04510
Focal adhesion
ccw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104688313 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104688313 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
104688313
NCBI-ProteinID:
XP_039417439
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Position
17:4477188..4562302
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AA seq
1227 aa
AA seq
DB search
MSGKIEKADSERSHLSSFTMKLKGKFHSPKIKRTPSKKGKQADLTVKTPEKSVNKNVSWL
EEKEKEVVSALRYFKTIVDKMAIDNKVLEMLPGSASKVLEAILPLVQTDPRIQQSSAISS
CYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKDVIKAVLDGVKELVRLTIEKQEHP
SPTSPVKPSLPACKSDSPSELPLTDREMEILNKTTNMTQSNELLTDSMDEEVAPPKPPLP
SIRVAENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRR
LSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDQSDHYDPDY
EFLQQDLSNADQIPQQGPGILSPLPESLGESGSPFHGHTFQLPQGSSPPLEFCSLSGAAQ
PTETPPALPEKKRRSAASQTLDNSGCRVSYERHPSQYDNISEDDLQNAVVVPSIPFTPFA
AVLPFQQGNSSGPVEFIADFAAPDSNSDPEKPPPLPEKKNKHMMAYMQFVEDYSEPQPSM
FYQTPQNEHIYQEKNKYLREVYGINDSFISLDPSQDLAPPPALPPKQRQLQASYAASSFS
SVSYCVQQPKVPFTPEDCGATQGLTMSVSNSFLSRHSSFPVHSYKSVFRSYSQDFVPHNQ
VSIPPFLSSTSSSCSTPPFPPVHPSQSPDLAVPAAASQSPSTVDVPNSSSQESSFNGNAP
VCLPSETSFTDSLQTPSSENASEEAGEGEYVNLYSSGQSNGELPHSEGESPPVKDGHSKD
SALNSSAMGKEGKDGAERQPQSPDTLESSQLEEEVDELSLIDHSEIMSRLTLKQEGDDGP
DVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFCHFPDTF
KKRVSKNTFFVLVRVVDELCLVELTEEILKLLMDLVFRLVCSGELSLARVLRKNILDKVD
QKKMLSYANSIKPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKE
QNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYL
AILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQ
DLTFVHLGNPDYIDSKVNFSKRWQQFNILDSMRCFQQVHYDIKRNDDIVSFFNDFSDHLA
EEALWELSLKIKPRNITRRKTDREEKT
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaagatcgagaaagcagattctgagcgttctcatctctcctcgttcacaatg
aagttgaaaggcaagtttcattcaccaaaaataaagagaacaccctcaaagaaaggaaag
caagctgacctgacagtgaaaacaccagagaagtcagtgaacaaaaatgtatcatggcta
gaggaaaaggagaaggaggttgtcagtgcattgcgctactttaagactattgtggacaaa
atggcaattgataacaaagtgttagagatgctgccaggctcagcaagtaaagtgctggaa
gccatcctgcccttggtgcaaactgacccacgcatccagcaaagttctgccatctcatcc
tgctacagccgagtgtaccagagcctggccaacctcatccgctggtctgatcaggtgatg
ctggagggggtgaattcagaggacaaggagatggtgacaacagtgaaggatgtcataaaa
gctgttctggatggagtcaaggagctggtcagactcacaattgaaaagcaggagcatccc
tctcccacaagcccagttaaacccagtttaccagcatgtaaatctgacagcccatcagaa
cttccccttaccgaccgagaaatggagatcctcaacaaaacaactaatatgactcaatcc
aacgagctactgactgactccatggatgaagaagttgcacctcctaaaccccctctgccc
agcattcgtgtggcagagaacagccctccaccagcactgccccctaaaaaacgtcagtcg
gcgccttccccaaccagagtggctgttgtggcccccatgagtcgagctaccagtgggtcc
agtttacctgttgggatcaacagacaggattttgatgttgactgctatgcccagaggaga
ttgtcaggtggaagccactcctatgggggggagtctcctcgcctgtctccgtgcagcagc
atcggcaaactgagcaagtctgacgagcagctctcctctctggaccgcgacagcggccag
tgctcccgcaacacaagctgtgaaaccttggatcaatcagatcactatgatccagactat
gaattcctgcagcaggacctctccaacgctgatcagatacctcagcaggggccaggtatc
ctcagcccattgccagagtccttgggtgagtctggctcccctttccatggacacactttc
cagctcccgcagggcagctctcctccactggaattctgcagcctctcgggagcagcacag
ccaacagagactcctccagctttaccagagaagaagaggaggagtgcagcctcccagact
ctggataactcgggctgcagggtgtcctacgagaggcacccttcccagtacgacaacatc
tctgaggatgacctgcagaatgccgtggttgtcccatcaatacccttcacgccctttgct
gctgttctgcctttccagcaaggaaactcttcaggaccagtggaattcattgctgatttt
gctgctccagattcgaacagtgacccagaaaagccgccacctctgccagagaagaaaaac
aaacacatgatggcctacatgcagtttgtggaagactactcagagccacagccgtccatg
ttctaccagacccctcagaacgagcacatctaccaggagaagaacaagtacctcagggaa
gtctacgggatcaatgactccttcatcagcttagacccctctcaagatctggcacctcct
cctgctctcccacccaagcagcggcagctgcaggcctcctatgctgcctcttctttctct
tctgtctcctactgtgtccagcaacctaaagtgcccttcacccccgaggactgcggtgcc
actcagggcctcactatgtcagtctctaactcctttctcagccggcacagctcctttcct
gtgcactcgtacaaatctgtgtttaggtcctactcccaggactttgtgcctcacaaccag
gtctccatacctcctttcctctcttctacctcttcctcctgctccaccccaccttttccg
cccgtccatccatcccagagccccgacctagcggtgcccgctgcagccagccagtcaccc
agtactgtggatgtgccaaactcctcttctcaggagagcagctttaacgggaatgctcct
gtctgccttccttctgaaacctctttcactgattctctccagacgccttcgagtgaaaac
gccagtgaggaggctggtgagggtgaatatgtcaatctgtattcctctggccagagcaac
ggggaactccctcactctgaaggagaatctccccctgtcaaagacggccactccaaagac
tccgctttgaacagcagtgccatggggaaggagggtaaagatggtgctgaaaggcagcca
cagtcaccagatactttggagtcatcacagctggaggaagaggtagatgagctgtccctt
attgaccacagtgaaatcatgtctagattaacactgaagcaagagggggatgatgggcca
gatgtccgtggtggatctggagacattctgctggtgcacgccacagagaccgacaggaaa
gatctggtgctgtactgtgaagcctttctgactacgtacaggacatttattacccctgaa
gagctcatcaagaagctgcagtacagatatgagaagttttgccacttcccggacacgttc
aagaagcgagtcagtaagaacaccttcttcgtgctggtgcgagtggtggatgagctgtgc
ttggtggaattgacggaggaaatcctgaagctgctgatggacctggtgttccggctggtg
tgcagtggggagctgagcctggccagagtgctgcgcaagaacatcctggataaagtggac
cagaagaaaatgctgagctacgccaactccatcaaacctctcgcagcccgaggcgtggca
gccaggccagggacactgcatgatttccacagtcatgaaatagctgagcagctgaccctg
ctggatgctgaactcttctataaaatcgagatcccagaagttttgctttgggcaaaggaa
caaaatgaagagaagagccccaacctgacacagttcacagagcactttaataacatgtcc
tactgggtccgttcaataattatgctacaagagaaagcccaggaccgagagaggctgctc
cttaaatttataaagattatgaagcacttacgaaagctgaataattttaattcctatctg
gccattctttctgcactggattctgcacccatccgaaggctggagtggcagaagcaaacc
tcagagggcctggctgagtactgcaccctgatcgacagctcctcgtccttccgcgcctac
cgggcagccctggccgacgtggagcccccctgcatcccctacctaggcctgattctgcag
gacctgacctttgtccatctgggaaaccctgattacattgacagcaaagtgaacttttcc
aagcgctggcagcagtttaacatcctggacagcatgaggtgcttccagcaagtacattac
gacatcaaaaggaacgacgacatagtgtcattcttcaacgacttcagcgaccacctggct
gaggaggccctgtgggaactgtccctgaaaatcaaacctcggaacatcacgaggcggaaa
acagatcgggaagagaaaacctag
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