Corvus cornix (hooded crow): 104688316
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Entry
104688316 CDS
T03546
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104688316 (TTF1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
104688316 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
WbqC
Poxvirus_B22R_N
TcaA_2nd
Motif
Other DBs
NCBI-GeneID:
104688316
NCBI-ProteinID:
XP_010396066
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All DBs
Position
17:4236598..4247686
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AA seq
706 aa
AA seq
DB search
MKGKARAGDFQVQDFVKKKKKKKRKHNGYKNKHENAESEEAPELGRASPLLFEDAAAQRG
EGRKKKKKLKEKGEKQQALIDNYCVRLEHEMSNGTGAAASPKKKRKRKSNESTDEHSDVT
CVPVNQYSTQDCQQDAADYVYFKKAKKKKKAKLPEADEVCELPPSEEHSKGHKEKSKKKR
KKRREGSAQDVQKDTDGAAEQSLLSSSEQSRGHRGCPSPVGEDGDCDAASAISEVSMEVP
ADFSTPSKAAEKTPAHAKKAKKSSTVVMEESSSECDMMTPKPSASNKKKKQKKQNSSFAE
LAASDEVSLDGEEGLDSVTSSVMDLDTARQELEEFIPHVKNISDSSIKKMAGRDLMRFKE
FKKQGIAVKFGRFTQKENKQIQKNVEEFLSLTGIDSAEKLLFTSRYPEDKDTIHRLKTEH
HFCEKISEGIPRPWRLIYYRARKMFDPNNYKGRYTKEEKEKLKKYQALHGNDWKKISELM
SRSNLSVAMKFSEIKSAINYGPWTKEETQKLMNAVKEVMRRKLKTENPSSLSSLEQSSTD
PWIEREKLYQQLPWTEIETKVGSRYWRQCKQKWNSILTSKLTKGQQLYRGSNGLQAKINL
IKRLYETKAEDASEVNWDELSNAIGDVPRAYVQAKFYRLKVSSVPLWKRKTFSEIIDYLY
EKKLPELEEKLRKKEGKHCSFDNSAASQQQKAFRLSDIFDSSEESD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaagctcgtgcaggtgattttcaagtccaggattttgtcaagaagaagaaa
aagaagaagaggaaacacaatgggtacaagaacaaacacgaaaatgctgaaagtgaagag
gctccagagctcggccgcgcttccccgctgctgtttgaagatgcagcagcacagcgtggg
gagggcaggaaaaagaaaaaaaagctgaaagaaaagggtgagaagcagcaggctttgata
gataattactgtgtgagactggaacatgaaatgagcaatgggactggagcagctgcttcc
cccaagaagaagaggaagcggaagagtaacgagagcactgatgagcacagcgatgtcacc
tgtgtccctgtgaaccagtacagcacccaggactgccagcaggatgctgctgattatgtt
tattttaaaaaagctaagaagaaaaagaaagcaaagctgcctgaagcggacgaggtgtgt
gagctgcctccctcggaggaacacagcaagggccacaaagagaaatccaaaaagaagagg
aagaagaggagagagggcagtgctcaggatgtgcagaaagacacagacggagcagctgag
cagtcactgctgtcatcctcagagcagagcagggggcacagggggtgcccttcacctgta
ggcgaggatggggactgtgatgctgcttctgccatcagtgaggtctccatggaggttcct
gctgatttttctacacccagtaaagcagctgaaaagactccagcacatgctaaaaaggcc
aaaaaaagcagcactgttgtcatggaagaaagctcttcggagtgtgacatgatgacacca
aaaccctcggcatcaaataaaaagaagaagcagaagaagcagaacagttcctttgctgaa
ttggcagcctctgatgaggtcagtctggatggtgaagaaggcctggactctgtcacgtct
tcagtcatggatttggatactgcaagacaagaactggaagagtttattcctcatgtgaag
aatatatcagacagttcaatcaagaagatggctggaagagacctaatgagatttaaggag
tttaaaaaacagggtattgctgtcaagtttggcagatttacccagaaggaaaataaacaa
atccagaaaaacgttgaagagttcctatcacttactggaatagacagtgctgaaaaactt
ctgtttacctcgaggtatccagaagataaagacaccatccatcgcctgaaaacagaacat
catttttgtgaaaaaatttctgagggcataccccgaccctggaggctgatatattaccga
gcaaggaagatgtttgacccaaataattataaaggaaggtatactaaggaagaaaaagaa
aaattaaagaagtatcaagctctgcatggcaatgattggaagaagatttctgagctgatg
tcccgttctaacctctcggttgctatgaaattctctgaaatcaagtcagctattaattat
ggtccttggacaaaggaagagacccagaagttaatgaatgcagtgaaggaggtgatgagg
aggaaactgaaaacagaaaatccaagttctctttcctcactggaacagtcaagcacagat
ccctggattgaacgtgagaagctgtaccagcaactgccatggactgagattgaaaccaaa
gtgggaagtcgatattggagacagtgcaaacagaagtggaattcaattttaacaagcaaa
ttgaccaaagggcagcagttatatagagggagcaatggattacaggccaagatcaacctt
attaaaaggttgtatgaaacaaaagcagaggatgccagtgaagtaaactgggatgaactc
agtaatgctattggagatgtccctagagcctatgttcaagcaaagttttataggctgaaa
gtgtcctctgtccctttatggaaaagaaagaccttttctgaaattattgattatctgtat
gaaaagaagctcccagaacttgaagaaaagttaagaaaaaaggaggggaagcactgtagt
tttgacaattcagcagctagtcagcagcagaaggctttcagactcagtgacatctttgac
tccagtgaagagagtgattaa
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