Corvus cornix (hooded crow): 104688380
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Entry
104688380 CDS
T03546
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1
KO
K20284
Rab GTPase-activating protein 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104688380 (RABGAP1)
Membrane trafficking [BR:
ccw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104688380 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
104688380
NCBI-ProteinID:
XP_039417565
LinkDB
All DBs
Position
17:complement(1576338..1639199)
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AA seq
1069 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QRELEDVLMDPPMEDQSSDRDHGEEVRTDGDGEEPVVLEASASSTINPVSVAGLQKPDMS
LPVKPSQGDCEDLSPFTPVTDEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQI
SLDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATATPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSRGKDVRSG
DMHLLDLESMGKSSDGKSYVITGSWNQKSPHFQFVNEETPKDKVLFMTTAVDLVITEVQE
PVRFILETKVRVCSPNERLFWPFSKRSSTENFFLKLKQIKQKDRKNNSDTLYEVVCLESE
SERERRKTTASPSLRLPQSGSQGSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGELLSKWHLNLSVRPKTLSALVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKES
PQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLL
HMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEA
HMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTTKDDLLLTDFEGAL
KFFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFER
ENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEE
EKRRLEEESAQLKEMCRRELDKAESEIRKNSSIIGDYKQICSQLSERLEKQQTANKAEIE
KIRQKVDDCEHCREFFNKEGRVKVASTAKDGSDEDTDEEKETLKNQLREMELELAQTKLQ
LVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKETC
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcttcagactcggtatccactctt
aacagtgaagattttgtcttggtttccaggcaaggggatgaaacaccatctacaaataat
ggtagtgatgatgaaaaaacaggactgaagattgtggggaatggaagcgaacagcagctg
cagcgggagctcgaagacgtgctgatggatccacccatggaagatcagtccagtgaccgg
gaccatggagaagaagttagaactgatggagatggggaagaacctgttgtccttgaagct
tcagcatcctctaccattaacccagtgtcggtggcaggactccagaaaccagatatgagc
ttgccagtgaaaccatcccagggagactgtgaggatttgagcccgttcacacccgtgaca
gatgaggacagcgtggtgttcagcaagctcacgtacctgggctgtgcctcggtgaacgcc
ccgcgcagcgaggtggaggccctgcggatgatgtccatcctgcgcggccagtgccagatc
tccctggacgtcaccctgtcggtgccgaacgtctctgaagggactgtgagacttttagat
cctcagacaaacacagaaatagcaaattatccaatctataaaatccttttctgtgtacga
gggcacgatgggacccccgaaagtgattgttttgctttcactgaaagccactacaatgca
gaactcttcaggattcatgtcttccgatgtgaaatccaagaggctgtgagccggatcctg
tacagctttgccactgccttccggcgctctgccaaacagaccccgctctcagccactgcc
accccccagactccagacagtgacatcttcaccttctccgtgtccctggaaatcaaagaa
gatgatgggaaaggttatttcagtgcagttcccaaagacaaggataggcaatgcttcaaa
ctccgccaagggattgataagaagatagtgatttatgtgcaacagacaacgaataaagaa
cttgctattgaaagatgttttggccttctccttagccgtgggaaagacgttcggagtggc
gacatgcaccttttggatttggagtccatgggtaaaagttctgatgggaaatcatacgtg
atcactgggagctggaatcaaaagtctccacacttccagtttgtaaatgaagaaacacca
aaagataaagtgttgttcatgaccactgctgtggatttggtgataactgaggtgcaggaa
cccgttcgattcattctggagactaaagtcagagtttgctcgcctaatgagaggttgttc
tggcccttcagcaaaaggagctcaactgaaaattttttcctaaaattgaaacagataaag
caaaaggacaggaagaacaactcggacacgttgtatgaggtcgtgtgcctggagagtgag
tcggagagggagagaaggaaaaccacagccagcccctctctccgcctgccgcagtcgggg
tctcaaggctccatgatcccatctcctccagaagatgatgaagaggaagacaatgatgaa
ccactcttaagtggttctggagatgtttccaaagagtgtgcagaaaaaattcttgagacg
tggggagagctgctgtccaagtggcacctgaacctgagcgtgcggcccaagacgctgtcg
gcgctggtgcggagcggagtccccgaggcgctgcggggggaggtgtggcagctgctggca
gggtgtcacaacaacgaccacctcgtggagaagtacaggatcctcatcacaaaggagtct
ccacaagacagtgccatcacccgagacatcaatcgaacgttccctgctcatgattatttc
aaagatactgggggagatggccaggactccctgtacaaaatatgcaaggcctactctgtg
tatgatgaagagattggctactgccaaggccagtcctttcttgctgctgtgctgctgtta
catatgcctgaggagcaagctttcagtgttctggtcaaaatcatgtttgattatggactc
agggaacttttcaaacaaaactttgaagatttgcactgcaagttctatcagctggagcgc
ctcatgcaggaatacattcctgatctgtataaccactttctggacatcagccttgaagca
cacatgtatgcttcccagtggttcctgaccctgttcactgcaaaattccctctctacatg
gtcttccatattattgacttactcctatgtgagggaataagtgttatcttcaatgttgca
ctgggattgttaaaaactaccaaggatgatttgttgctgactgactttgaaggggcttta
aagttcttccgtgtgcagctgcccaagcggtaccgctctgaggagaacgccaagaagctg
atggagctggcctgcaacatgaagattagccagaagaagctgaagaaatatgaaaaagag
tatcataccatgagagagcagcaagctcaacaggaggaccctatagaaagatttgagcgc
gagaaccggcgcctgcaggaagccaacatgagactggagcaggagaacgacgacctcgcc
cacgagctggtcaccagcaagattgcactgaggaaggacttggacaatgcagaggagaag
gcagatgccctcaataaggagctgcttatgaccaaacagaagctgattgatgcagaagaa
gaaaagaggcgcctggaggaagaatccgctcagctgaaggaaatgtgtcgcagggaacta
gataaggcagagtcagagatcagaaagaacagctctattattggtgactacaagcagatt
tgttcccagctgagtgagcgactggaaaagcaacaaacagcaaataaagctgaaattgag
aaaatacggcaaaaggtggatgactgcgagcactgccgtgagttcttcaataaggaaggc
cgtgtgaaggttgccagcactgctaaggatggttcagacgaggacacggatgaggagaag
gaaacactgaaaaatcagctgagggaaatggagcttgagctggcccagaccaagctgcag
cttgtggaggcggaatgtaaaatacaggatttggagcaccatttgggtctggccctgaat
gaagtacaagctgcaaagaaaacgtggttcaacagaacaataagctctataaaaacagtg
actggagtccaaggaaaagagacttgttga
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integrated database retrieval system
