Corvus cornix (hooded crow): 104688381
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Entry
104688381 CDS
T03546
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104688381
Spliceosome [BR:
ccw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104688381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
dsrm
SGP
Dicer_dsRBD
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
104688381
NCBI-ProteinID:
XP_019140375
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All DBs
Position
17:1507778..1567792
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AA seq
693 aa
AA seq
DB search
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWMDEKNKSAKCEG
DVEAKEEAAEGTAKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTKTLLCIV
KDNLPAQIQKLTEEKYLVEEHVNEAAIVIHNTKEPKLTLKVILTSPLIRDEAEKKEGVDN
VAMKDPPDLLDRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKG
WPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEREPTDALSYMTV
QQKEAITHSAQHALRLSAFGQIYKVLEMDPLPSNKSFQKYSWSVTDKEGTGSSALKRPFE
DSVGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTM
SVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADVECVSSDEKSDTEGKNETTS
SISSNNNTGNSTADTSATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDK
RFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKILPQTKGVVNTA
VSAAVQAVRGRGRGALTRGAFVGAAAATGYITPGYGAPYGYSTAAPAYGTYSPVINTVEI
MQKLLWQSKCDSPRRNSKRFKLLNHDNNTTFMP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgatccgatcttttgctaatgatgaccgccacgtaatggtgaaacattcaacc
atttatccatctccagaggagcttgaagctgtccagaacatggtctcaacagtagaatgt
gcccttaagcatgtctctgactggatggatgaaaagaacaagtctgcaaagtgtgagggt
gatgtggaagccaaggaggaagccgcagaaggcactgccaaggatcaaggtggtcggacg
ttatgtggcgttatgagaattggcttggttgcaaagggcttgctgatcaaagacgatatg
gatctggagctggttctcatgtgcaaagaaaaacccacaaagaccttgttatgtattgtt
aaagacaatctcccagctcaaattcagaaacttacagaagagaagtatctggtggaggag
catgtaaatgaggcagctattgttattcataacacaaaggagcccaagctcactttgaag
gtgatactcacatcccctctcatccgagatgaagcagagaagaaagaaggagtagataat
gttgcgatgaaagatcctccggacttattggacaggcagaaatgcctggaggccttggcg
tctctgcggcacgccaaatggtttcaggccagggcaaatggactaaaatcatgtgtaatt
gtccttcgtattctgcgggatttgtgcaacagagtccccacatgggcaccactgaaaggc
tggccactcgagcttatatgtgaaaaatctataggtacttgtaatagacctttgggcgct
ggggaagcgttgcgacgagtgatggagtgtttggcatctggaattctgcttcctgggggc
ccagggctgcacgacccctgcgagcgcgagcccacggacgctttgtcttacatgacagtt
cagcaaaaagaagccattacacacagtgctcagcacgcgctcagattatcagcctttggg
cagatctataaagttttggaaatggatcccctcccatcaaataagtcatttcagaaatat
tcctggtcagtaactgacaaagaaggtacaggctcgtctgctctgaagagaccgtttgaa
gacagtgttggggatgataaagatccaaataaaaagatgaagcgtaatctgaggaaaata
ctagatagtaaagcaatagatctcatgaatgctctgatgaggctgaaccaaatcaggcca
gggcttcagtataagctgctgtcacagtctggtccagtccatgccccagtcttcacaatg
tctgtagatgttgatggtacgacttatgaagcttcaggaccttctaagaaaacagccaag
ctccatgtggcagtgaaggttttacaagcgatggggtatccaacgggttttgatgcagat
gtggagtgtgtaagttctgatgaaaaatcagatactgaaggtaaaaatgaaacaacgtct
tcaatctcaagcaataataatactggaaattccacagccgacacctccgctaccctagag
gtaagaactcagggtcccatactcacagcaagtggcaaaaacccagtgatggagctgaat
gaaaagagaagaggtctgaagtatgagctcatttccgagacagggggaagccacgacaag
cgcttcgtcatggaggtagaagtagatgggcagaagttcagaggtgcaggcccaaacaag
aaagtagcaaaagcaagtgctgcattagcagcacttgaaaaactgttttctgggcctaat
gcagcaaataacaagaaaaagaagattcttcctcagactaaaggggttgtcaatacagct
gtttctgcagcagtccaggctgttcgaggcagaggacggggtgctttaacacgaggggca
tttgttggggcagctgctgctactggatacataacaccaggctatggagcaccatatgga
tacagcacagcggcaccagcctacggtacgtacagccctgtaattaacacggtagaaatt
atgcagaaactgttgtggcagtccaaatgtgacagtccaaggagaaattcaaagagattt
aagctcttaaaccatgacaacaacaccacttttatgccataa
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