Corvus cornix (hooded crow): 104688473
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Entry
104688473 CDS
T03546
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104688473 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104688473 (EXOSC2)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104688473 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104688473 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
Motif
Other DBs
NCBI-GeneID:
104688473
NCBI-ProteinID:
XP_039417879
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Position
17:complement(4876634..4883058)
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AA seq
294 aa
AA seq
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MAAVTMRLPALRAPVDSGAPRGGEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLAQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTTNLEPVPLSDREVISRLRN
CIMALVTHKMMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLEARQRLLDLEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtcaccatgaggctgccggcgctccgcgcgcccgtggactccggcgcgccc
cggggcggcgagaagcacctggtggcaccgggggacacgatcaccacggacacgggatat
atgaggggccacggtacttatgtggaggacgacaagctgatcgcctcggtggccggcgtg
gtggagagagtgaacaagctggtgtgcgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacatcgtggtcgggaggattacggaggttcagcagaagcgatggaaagtggaa
acgaattccaggctggattcagtcctgttgctgtcgtctataaatttacctggtggggag
ctgagaaggaaatcagcggaagatgagcttgcgatgagggactacctgcaggaaggggat
ctcatcagtgcagaggtccagtctatattttctgatggggctgtatcgctgcacacccgg
agcctgaaatacgggaagcttgcccagggtgtgctggttcaggtctctccctcccttgtg
aaacgccagaagactcatttccatgacctgccctgtggtgcatccgtgatcctcggcaac
aatggcttcatctggatctacccaactccagagcagaaagatgacgaggctggaggctac
accaccaatttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaat
tgcatcatggctctggtcactcacaagatgatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctcaaaccagaggtgacagaggag
atcgttctggaagctcgacagaggttgctggatttggagggatag
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integrated database retrieval system