KEGG   Corvus cornix (hooded crow): 104688473
Entry
104688473         CDS       T03546                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104688473 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccw03019]
    104688473 (EXOSC2)
Messenger RNA biogenesis [BR:ccw03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104688473 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104688473 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 EXOSC1
Other DBs
NCBI-GeneID: 104688473
NCBI-ProteinID: XP_039417879
LinkDB
Position
17:complement(4876634..4883058)
AA seq 294 aa
MAAVTMRLPALRAPVDSGAPRGGEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLAQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTTNLEPVPLSDREVISRLRN
CIMALVTHKMMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLEARQRLLDLEG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcggcagtcaccatgaggctgccggcgctccgcgcgcccgtggactccggcgcgccc
cggggcggcgagaagcacctggtggcaccgggggacacgatcaccacggacacgggatat
atgaggggccacggtacttatgtggaggacgacaagctgatcgcctcggtggccggcgtg
gtggagagagtgaacaagctggtgtgcgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacatcgtggtcgggaggattacggaggttcagcagaagcgatggaaagtggaa
acgaattccaggctggattcagtcctgttgctgtcgtctataaatttacctggtggggag
ctgagaaggaaatcagcggaagatgagcttgcgatgagggactacctgcaggaaggggat
ctcatcagtgcagaggtccagtctatattttctgatggggctgtatcgctgcacacccgg
agcctgaaatacgggaagcttgcccagggtgtgctggttcaggtctctccctcccttgtg
aaacgccagaagactcatttccatgacctgccctgtggtgcatccgtgatcctcggcaac
aatggcttcatctggatctacccaactccagagcagaaagatgacgaggctggaggctac
accaccaatttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaat
tgcatcatggctctggtcactcacaagatgatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctcaaaccagaggtgacagaggag
atcgttctggaagctcgacagaggttgctggatttggagggatag

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