Corvus cornix (hooded crow): 104688538
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Entry
104688538 CDS
T03546
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104688538 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104688538 (MSI1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104688538 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
104688538
NCBI-ProteinID:
XP_039417032
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All DBs
Position
15:10416319..10446746
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AA seq
357 aa
AA seq
DB search
MACPSGPFSSAHLPREYGAAPRREKSKMFIGGLSWQTTQEGLREYFSQFGEVKECLVMRD
PLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVG
GLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEI
NNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTG
IAPGYTYQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSTPSRTG
GFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtccgtccggccccttttccagcgctcatctgccccgggagtacggcgccgct
cctcgcagggagaagagcaaaatgttcatcgggggactgagttggcagaccacgcaagag
ggcttgcgggagtacttcagccagttcggcgaggtgaaggagtgcctggtgatgcgggac
ccgctgacaaagagatccaggggcttcgggttcgtcacgttcatggaccaggctggcgtc
gacaaggtcctggcccaatccagacatgaactggactccaagacgattgacccgaaggta
gcattccctcgccgagcacagcccaagatggtgacccgaacgaagaagatatttgtgggt
ggtctgtctgtgaacactactgtggaggatgtgaaacagtattttgagcagtttgggaag
gtggatgatgctatgctgatgtttgacaagacaacgaaccgacaccgaggatttgggttt
gtcacatttgaaagtgaagacattgtggaaaaagtgtgtgaaatccatttccatgagatc
aacaacaaaatggtggagtgtaaaaaagctcagccgaaggaggtgatgtctccaacgggc
tctgcacgagggcggtcccgagtcatgccttacgggatggatgccttcatgctgggcatc
ggcatgctgggttatccaggcttccaagctgccacctacgcgagtcgaagttacactggc
attgcacctggttacacttaccagtttcctgagttccgtgtagagcggacccctctcccg
agtgcccccgtcctccctgagctcacagcaatccccctcactgcatatggaccaatggca
gcagcagcggctgcagcggccgtggtgcgagggacaggttccacccccagtcgcactggt
gggtttctgggcaccaccagtcccgggccgatggcagagctttatggagccgccaaccag
gactcaggggttagcagttacatcagcgctgccagtccagccccaagcaccggctttgga
cacagcctagggggtcccttgattgcaacagcttttaccaatgggtatcactga
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