Corvus cornix (hooded crow): 104688550
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Entry
104688550 CDS
T03546
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104688550 (HNF1A)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
104688550 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
NanE
KPBB_C
YebO
Motif
Other DBs
NCBI-GeneID:
104688550
NCBI-ProteinID:
XP_010396379
LinkDB
All DBs
Position
15:complement(10119538..10133283)
Genome browser
AA seq
674 aa
AA seq
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MVSKLTHLQVELLEALLESGLTKETLIKALSEAEPYGLQSESQHAINALQTEKGEPCPDI
PNLPNGMGESRLSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQRK
YGNDCSPVSVSERPLLSLARPYSLLFSRKKFPCSFVLAEFTHAGQGILTDEPMGDDLPTK
KGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAECIQRGVSPSQAQGLGSN
LVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPTSAPPLTPHNSSSLQPPPALSPSKVH
GVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGLEPSQNLLSTDTKLVSAPGGT
LPPVSTLTALHSLEQSPHTLSQQTQNLIMASLPGVMAIGASETPSLAPAFTNTGASTLVI
GLASTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPLMQQVQSHINQSPFMATMAQI
QNPHALYGPKSEVTQYTHTGLLPQTMVITDTANLSALTSLTPTKQAFTPDSETHTESGMH
TPVSQAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSSSLVLYQSSDSTNSHSQLLPSTHNV
IETFISTQMASSSQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtctcaaagctgactcatctccaagtggagctgctggaagcgctgctggagtcgggg
ctgaccaaggagaccttgatcaaggcattgagtgaagcggaaccctacgggctccagagt
gaaagtcagcatgctatcaatgccctccagactgagaaaggggagccctgtcccgacatc
cccaacctccccaatggaatgggggagtccaggttatcagaagatgaaacctcagatgac
ggggaggaatttacccctccaataatgaaggagctggaaaacttgagccctgaggaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgagtagcaaag
atggtgaagtcttacctccagcagcacaacatccctcagcgtgaggtggtagacactact
ggtctgaaccaatcccacctctcacaacaccttaacaagggcactcccatgaagacccaa
aaacgggcagccctgtatacctggtacgtccggaagcagcgagaggtggcccagcgtaag
tatggcaacgactgctctcctgtctcagtttcagaaaggcctctgctctcccttgctcgt
ccttactccctattgttttcaaggaaaaaattcccttgctcctttgtgcttgcagaattc
acacacgctggccagggtatactgacagatgagcccatgggagatgacctgcccaccaag
aagggaagaagaaaccgctttaagtggggtcctgcctcacaacagatcctgttccaagcc
tatgagaggcagaaaaaccccagcaaagaagagagggaggcactggtggaagagtgcaac
agggcagaatgcattcagagaggtgtttccccatctcaggcccagggactgggctcaaac
ctggtgacagaggtcagagtttacaactggtttgccaatcgcaggaaggaggaggctttc
cggcacaagttggccatggacaccttcagcggaccacagcccacctctgccccccctcta
actccccacaactcctcctccctccagccaccacctgctctctcacccagcaaagttcac
ggggtgaggtacaaccaacagccagccagcgaggcagagtcctccagcagcaaccaccac
gggaacagctccatggtgaccacccaaaccatcctgcatcaggtttctccccctggactg
gagcccagccagaacctgttgagcacagacactaagctggtatcagctcctggaggaact
ctccctcctgtcagcaccctgactgccctgcacagcctagagcaaagcccacacacgctg
agccagcagacccagaacctgataatggcatccctgccaggggtcatggcaatcggggcc
agcgagaccccatccctggcacccgccttcaccaacacaggagcctccaccctggtgatc
ggcctggcctcaacccagccccagagtgttcctgtaataaacagcatggggagcagcctc
actaccctgcagcctgtccagttctcgcagcaactgcacccatcctaccagcagcccctc
atgcagcaagtccagagtcacatcaaccagagccccttcatggccaccatggctcagata
cagaaccctcatgctctctatggccccaagtctgaagtgacccaatacacacacacaggc
ctcttaccacaaaccatggtgataacagatacagccaatctcagtgccctgaccagcctg
acaccaactaaacaggcattcacacctgactcggagactcacaccgagtctgggatgcac
acaccagtgtcacaggcaccaacaatccatctacagaaccaagacacaaccatccagcac
cttcagccaggcccacgtctcacctcgagccctgctgtgtcctccagcagcctggtgctg
taccaaagctccgactccaccaacagccacagccagctgctgccatccactcacaatgtc
atcgagaccttcatctctacacagatggcatcttccagccagtaa
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