Corvus cornix (hooded crow): 104688559
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Entry
104688559 CDS
T03546
Symbol
LTBP2
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 2
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104688559 (LTBP2)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104688559 (LTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
EGF_MSP1_1
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
104688559
NCBI-ProteinID:
XP_039408440
LinkDB
All DBs
Position
5:23376684..23445653
Genome browser
AA seq
1750 aa
AA seq
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MRGAAASLLPLTFAVLLGFARCRPDSAARLEPGTGGAARLRSRGAALGAVGTAHSLSPAS
RSPPPSRPLPAAPPTVDRGSAAAAGSPSDADGRRQRPDRRLPTPRGQGGDAGLGPGAGQR
NRQDSSRQRQGSGLKARVVPRAKEPSGRGRMAGPNVCGRQCCPGWTTAPGTNRCIKPVCD
PPCQNKGSCSRPQVCTCRSGFQGFRCEEVVPEQEYHPPGAVAAFQPPTSSLRRRTSTIGR
DASPQGAQAPIPRHVPAVIQSRIGSPVSPQHTGSSRTVRRYPASNGQLTSNALPNGNGYE
QSSSGPHAVSQEHTLSAKGANLTEKIRKIKIVFTPTICKQTCQSGRCYNSCEKGDTTTLY
SQGGHDHDPKSGFRIYFCQIPCLNGGRCVGRDECWCPSNSTGKFCHLPAPSLEKKQGGRG
PKTPAGSSMKHSTYTLPLSNQLASLNPSLVNVHINHPPEATVQIHQVARVRGDAEVSEEN
SVEAVLVPQLAAVPWYTYAHGNGNSIATESGQQQQRAPGLLGRCFREALHGQCTNPLPGL
TKLEDCCGSVGLFWGMDQCLACPPRPAHPVIENGQVECPQGYKRLNRSHCQDINECLMQG
LCKDAECVNTRGSFRCTCKPGTMLDPSRSHCISDKAVSMEQGLCYRSAAGGVCTFPLSHR
ITQQICCCSRVGKGWGDNCEECPMPGSEAFREICPAGHGYTYSSSDIRLSMRKAETEELP
LSLEEQGENSNWTLDWTVRRQQLQDSLRGSILEAFPYPGTSARQGEISPAVQGTADATAE
PAMRRAEEEEFRHGARQPGPTTTWDAAAPTQVPAGVSGCASSPLSCGAGACVLTPEGYSC
LCHPGYTLDPSRLHCIDEDECLKDPCAGKGRCINSVGSYFCLCYSGYTLAVSAGKQSCED
RDECEQPSICRGQRCINTPGSYHCQCKEGFTMGPRGQCEDVNECLDPSSCPSGRCVNTLG
SYKCVSCGGGYRPRNGRCIDVDECLVEGTCAHGLCVNLDGSFRCSCYRGYEVAPDGKSCQ
DIDECTAQAACPSGLCLNTEGSYSCTSCDTGYTVSRDGSMCEDVDECEDPAVQCLGGECR
NTPGSYECHCQTGFELINGTVCQDVNECLNSEICSPNGECLNSHGSYFCICAPGFSNVAG
RVSCQDVDECADKSLCSQGQCLNTEGSYRCLCENGFKHSQETDDCVDVDECKEYGDAICG
TWRCQNSLGSYRCIMGCQPGFHWTPLGDCIDIDECANETLCGSHGFCENSDGSFRCLCDR
GYESSPSGHYCIDVNECELMVAVCGTALCENVEGSFLCLCPSDHEEYDTEAGQCKPQAAM
EGSDTHAAHPSDSAERKQCYYHISDVRLCDSVLAKNITKEECCCTVGAAWGDNCETYPCP
IPGTVEYQEICPLGKGYIPQKDLLSGKVSFTDMDECEIFGSEFCRNGQCLNTVPGYKCFC
RTGYFYDSSRLECVDQDECQNEVYCINGECLNTEGSYHCFCSLPLVLDATGNRCVNFSSR
ADALEEYEIHLDVCWQTVADYICQDLLHGQQTTYTECCCRLGEAWGQNCALCPHRSSADF
AFLCNGASEGSERGAELRERPRYEYGPGLEDPHYGLPSPYYNYLESEYGNPDAGFPRREP
SSEFRGSPFHHGPARSPPHYLPSQAGLYEGFEGLQAEECGILSGCENGRCVRVPEGYTCD
CFDGFQLDMTRMACVDINECEEVGSPEPLCRGGTCENTEGSYRCQCLPGYVALARSHHCV
PQTAQNPAVA
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgctgccgccagcctcctcccgctcaccttcgccgtcctcctgggcttcgct
cgctgtcggccggactcggcggctaggctggagccggggaccgggggggcggcgcggctg
cggagccggggggctgccctgggggcggtgggcacggcgcacagcctgtccccagcgtcc
cggtcccctccaccgtcacggcccctccccgccgcccctcccacggtggaccgcggctcg
gcggccgccgcggggagcccgagcgatgccgacggccggaggcagcgtcccgaccgcagg
ctgcccacgccccggggccaagggggcgatgccgggctcggtcccggcgcgggacagagg
aacaggcaggactcctcccgccagcgccagggcagcgggctgaaagcgcgagtcgtgccc
cgggcgaaggagccgagcggcagagggaggatggcggggccaaatgtctgtggcagacag
tgttgcccaggatggaccacagctccaggcacaaaccgctgcatcaaacctgtctgcgac
ccgccatgccagaacaagggctcctgcagccgcccccaggtctgtacctgtcgctcaggc
ttccagggcttccggtgtgaagaagttgttcctgagcaggagtaccacccgcctggtgcc
gttgctgccttccagccccccacaagctccctccggaggaggaccagcacaatagggcgg
gatgcctccccgcaaggggctcaggcgcccatcccacggcatgtcccagctgtgattcag
agcagaattggctctcctgtctcccctcagcacacagggtcatcaaggactgtccggcgc
tacccagccagcaatggccagctcacctctaatgcactccccaatgggaatggatatgag
cagagcagctctggcccacatgctgtttcccaggagcacaccttgtctgcaaagggggcc
aacctgacagagaagattaggaagataaaaattgtcttcacacccaccatctgcaaacag
acatgccagagtgggcgctgctacaacagctgcgagaaaggagacaccaccactctctat
agccaagggggacatgaccacgatcccaaatctggcttccgcatctacttctgtcagatt
ccctgcctgaatggagggcgctgcgtgggccgggatgaatgctggtgcccctccaactcc
acagggaagttttgccacctgccagctccctctctggaaaagaagcaaggagggagaggc
ccaaagaccccagctggcagctccatgaagcactccacatatactctacccttgtccaac
cagctggcttccctaaacccttctctggtgaatgtccacatcaaccaccctccagaagcc
accgtgcaaattcatcaggtggccagggtgcggggtgatgctgaggtgtcggaggaaaac
agtgtggaggcagtcctggtgcctcagctggctgctgtgccctggtacacctatgcccat
gggaatggcaacagcattgccactgagagcggacaacaacagcagagagccccgggactg
ctggggaggtgctttcgggaggctctccatgggcagtgcaccaaccccctgccagggcta
accaagctggaggactgctgcggcagtgtggggctcttttggggcatggaccagtgcctg
gcctgtcccccccggccagcccaccctgtgattgagaatggacaggtggagtgtccccag
ggatacaaaaggctgaaccggagccactgccaagatatcaacgagtgcttgatgcagggc
ctctgcaaagatgccgagtgtgtgaacacccgtggcagcttccgttgtacctgcaagcct
ggaaccatgctagacccatcccgtagccattgcatttcggacaaagcggtgtcgatggaa
caggggctgtgttaccgctcggcagccggaggcgtgtgcaccttccccctctcgcaccgc
atcacccagcagatctgctgctgcagccgcgtcggcaagggatggggggacaactgtgag
gagtgccccatgcctggctcagaggccttcagggaaatttgcccagcaggacatggctat
acctactccagctctgatatccgactgtcaatgaggaaggcagagacagaagagctgccc
ctcagcttagaagagcaaggggagaacagcaactggactttggactggacagtgaggaga
cagcaactgcaggacagcctgcgtggcagcatcctagaggcgttcccctaccctggcacc
tcagcaagacagggtgaaatttctcctgctgtgcagggcactgctgatgccactgcagag
cctgccatgcgcagagcagaggaagaggagttccggcatggtgctcgtcagcctggcccc
actaccacctgggatgctgctgctccaacacaggtgccagcaggggtcagtggctgtgcc
tcctcacccttatcctgtggagctggtgcttgtgttctcaccccagagggatacagctgc
ttgtgccaccctggttacaccttggaccccagccgcctccactgcattgatgaagatgag
tgtctgaaagacccttgtgctgggaaaggtcgctgcatcaatagtgtgggctcctatttc
tgcctctgctactctgggtacaccctggctgtctcagcgggcaagcagagctgtgaggac
cgagatgaatgtgagcagccttctatctgccgaggacagcgatgcatcaacacacccggc
tcctaccactgccagtgcaaggaaggctttaccatgggccccagaggacagtgtgaagac
gtcaacgagtgcctggatcccagctcttgccccagtgggagatgtgtcaatacactagga
tcctacaagtgtgtcagctgtgggggtggctaccggcccaggaacgggagatgtattgat
gtggatgaatgtcttgtggaggggacttgtgctcatggactatgtgtcaacctggatggc
tccttccgctgttcctgctaccgaggctacgaggtggcacctgatgggaagagctgccaa
gacatcgatgaatgcaccgcccaggctgcctgtccctccggactctgcctcaatactgag
ggctcctattcctgcacgtcttgtgacaccggctatactgtctccagagatggcagcatg
tgtgaagatgtggatgagtgtgaggaccctgctgttcagtgcctggggggagagtgcaga
aacacaccaggctcctatgagtgccactgccagactggctttgagctcatcaatggcacc
gtgtgtcaagatgtgaatgagtgcctgaacagtgagatctgtagtcccaatggcgaatgt
ctcaacagtcatggatcctacttctgcatttgtgctcctggcttctcaaatgtggctggc
agagtcagctgccaagatgtggatgaatgtgcagacaagtccctgtgctcgcaaggccag
tgtctgaacacggaaggctcctacaggtgtctgtgtgaaaatggattcaaacactcccag
gagactgatgattgcgtcgacgtggatgagtgtaaagaatatggggatgccatctgcggc
acatggcggtgccagaacagcctgggctcctaccgctgtatcatgggctgccagcctggc
ttccactggacacccctgggtgactgcattgacattgatgaatgtgccaacgagacgctg
tgcgggagccacggcttctgcgagaactcagacggctccttccgctgcctctgtgaccgc
ggctatgagagctcaccctccgggcactactgtattgatgtgaatgagtgtgaactgatg
gtcgccgtgtgcggaactgcactttgcgagaatgtggagggatccttcctgtgcctctgc
cccagtgaccacgaggagtacgacacagaggcagggcagtgcaagccccaagctgccatg
gagggctccgacacacacgcagcccacccctctgacagtgcagagcgcaagcagtgttac
taccacatcagtgacgttcgcctgtgtgacagcgtcctggccaagaacatcaccaaggag
gagtgctgttgtactgtgggggcagcctggggtgacaactgtgagacttacccctgcccc
atcccaggcacagtggagtaccaggagatctgccctcttgggaagggctatattccccag
aaagatctgctctcaggaaaagtctctttcacagacatggacgagtgtgagatatttggc
tctgagttctgccgcaatggacagtgtttgaacacggtgccgggctacaagtgcttctgc
cgtacaggatacttctatgactccagcaggcttgagtgtgttgatcaggatgagtgtcag
aacgaagtgtactgcatcaacggtgagtgtctgaacacagaaggctcctaccactgcttc
tgcagcctccctcttgtgctggatgccactggcaaccggtgtgtgaatttctccagcagg
gcagatgccttggaggagtatgaaatccacctggatgtctgctggcagaccgttgctgac
tacatctgccaagacctgctacatggccagcagaccacatacaccgagtgctgctgccgg
cttggtgaagcctggggccagaactgcgcactttgtccccacaggtcctccgctgatttt
gctttcctgtgtaatggggccagtgaaggcagtgagagaggggctgagctccgagaacga
cctaggtatgagtatggaccgggcttggaagatccccactatggccttcccagcccctac
tacaactacctggagtctgagtacggaaaccccgatgctggtttccctcggagggaaccc
agcagtgagtttcgtggcagccctttccaccatggcccagcgcggtctccaccccactac
ctgcccagccaagctggcctctacgagggcttcgaggggctgcaggcagaggagtgcggg
atcctcagcggctgcgagaacgggcgctgcgtgcgcgtcccggagggatacacctgcgac
tgcttcgacggcttccagctggacatgacccgcatggcctgcgtggatatcaacgagtgt
gaggaggtgggcagccctgagcccctgtgccgaggtggcacctgcgagaacacagagggc
tcctaccgctgccaatgtttgccgggctatgtggccctggcccggtcacaccactgcgtg
ccccagacagcccagaacccagcagttgcgtag
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integrated database retrieval system
