Corvus cornix (hooded crow): 104688599
Help
Entry
104688599 CDS
T03546
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04142
Lysosome
ccw04144
Endocytosis
ccw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104688599 (CLTCL1)
04142 Lysosome
104688599 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104688599 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104688599 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
104688599 (CLTCL1)
Membrane trafficking [BR:
ccw04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104688599 (CLTCL1)
Exosome [BR:
ccw04147
]
Exosomal proteins
Proteins found in most exosomes
104688599 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
104688599
NCBI-ProteinID:
XP_039416984
LinkDB
All DBs
Position
15:8731394..8766002
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKDAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTV
ALVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFAEFKVEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATG
NQPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRIS
ADTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAG
AEELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQD
EEPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYME
VVQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQ
QVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFA
CVDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFF
SKVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRL
EKHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLE
EGKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDK
LDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcctattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaacattggtttcagcaccctaacaatggaatctgacaagttcatctgcata
agggagaaagtaggagagcaggcgcaagtagtaataattgacatgagcgatccaacaaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatccagcttctaaagtaata
gcactaaaagatgctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatg
aaagcccacacaatggcagaggaagtgatcttctggaaatggatatctgtgaatacagtt
gccttggtgacagagacagcagtgtaccactggagcatggagggagaatcacaaccccaa
aagatgtttgatagacatgctagtcttgcaggctgccaaatcatcaattacagaacagat
gaacaccagaagtggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggt
gcaatgcagctgtactcggttgatagaaaagtctctcaacctatagaaggccatgcagca
gcttttgcagaattcaaagtagagggaaatgccaaaccttctaccctcttctgttttgct
gtgaggagtcctgcaggaggcaagctgcacataatcgaagtaggtcagccagctactgga
aatcagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacaaacagac
ttccctgtggcaatgcagattggaattaagcatggtgttatttatctgatcacgaagtat
ggatatatccacatgtatgacttagagtctggagtgtgcatctacatgaaccgtattagt
gctgatactatttttgtcacagctccccatgaacctacctcaggcatcattggcgtgaac
aaaaaaggacaggtgctttctgtatgtgttgaggaagacaacatagtgaactatgctaca
aatgttctccagaatcctgacttgggactgcgaatggctatacgtagcaacctagctggg
gcagaggaattatttgcccggaagtttaacacactgtttgctcaaggaaactatgcagat
gctgctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaattagg
aaattccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttgga
atattgcttgatcagggacagctgaacaagtttgaatctctggagctctgtcgccctgtc
ttgcagcagggccgcaaacagcttctggagaagtggctgaaggaagacaagctggagtgc
tcagaggagctgggagacttggtgaagacggctgacccaacccttgcactcagcgtctac
cttcgagctaatgtgccaaacaaagtgattcagtgctttgctgaaactggtcaattccag
aaaatagtgctgtatgctaagaaggttggctataccccagactggatctttctactgaga
agtgtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggtacaggat
gaggagccattggctaacattaaccagattgtggatgtattcatggagcacagtcttctg
cagcagtgcacatcctttttgttggatgccctgaaaaacaaccgccctgcagagggccac
cttcagacccgtctcttggaaatgaatttgattcatgccccgcaggttgcagatgccatt
ctcggaaaccaaatgtttacacactatgatcgtgctcatgttgcccagctgtgtgaaaag
gcaggcttgctccagcgagctttggaacactacacagatctctatgatattaaacgtgca
gttgttcatactcacctcttgaatcctgagtggcttgtgaacttctttggctctctctca
gttgaagactctgtggagtgtttgcgtgccatgctatcagccaacattaggcaaaaccta
cagctctgtgtgcaagttgcttctaaataccatgaacagcttggcacccagtctcttgtg
gagctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgta
aactttagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagactggt
cagataaaggaagtggaaagaatctgccgtgaaagtaactgctataacccagaacgagtg
aagaattttctgaaggaggcaaagcttacagatcagcttcctctgatcattgtctgtgat
cggtttgactttgttcatgacctggtgctctatttatatcgcaataacctgcagaagtac
atcgagatctatgtacagaaggtgaatcctagccgtataccagcagtggttggagggctt
cttgatgtagattgttctgaagatgtcatcaaaaacttgatcatggtggtgagagggcag
ttctccacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttg
ccatggcttgaatcaaggattcatgaaggctgtgaagaacccgcgactcataatgctttg
gccaaaatctacattgacagtaataataatccagagcgcttccttcgtgagaatccttac
tatgacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgtt
gcttatgagagggggcagtgtgatctggaactcataaaggtgtgcaatgagaactccctg
tttaagagtgaggctcgctatctggtgcgcaggaaggaccctgagctctgggcaaatgta
ctggaagaaaacaacccattcaggcggcagcttattgaccaggttgtccaaacagcttta
tcagaaacacaggatccagaggaagtttccgtaactgtgaaagctttcatgactgctgat
ctgccaaatgaactgattgagttattggaaaaaattgtcttggataattctgtattcagt
gaacacaggaatctccagaatctgctgatcctgactgccattaaagctgaccgcacccga
gtgatggaatacatcaatcggctggataactatgatgccccagatattgcaaacattgcc
atcagtaatgagctatatgaggaagcctttgctatattcagaaaatttgatgtcaatact
tcagcaattcaggtgctgattgagcacattggcaacttagaccgtgcttatgaatttgca
gagagatgtaatgaaccagcagtgtggagccagctggctagagcacagctccagaaggat
ttggtgaaggaagccattgactcctatataaaggcagatgatccatctgcctacatggaa
gttgttcaggcagctaatagaaatgataactgggaggacctagtcaagttcttacagatg
gccaggaagaaggctagagagtcttatgtagagacagaacttatttttgctttggcaaaa
actaatcgtctgtcagaactggaagagtttattagtggccccaataatgcccatatacag
caggtcggtgatcgctgttacgaagaggggatgtatgaagcggcaaaacttctctataac
aacgtatccaactttgctcgcctggcatctaccttggtgcaccttggggaatatcaggca
gcagtggacagtggccgcaaagccaacagcacgaggacttggaaggaggtctgctttgcc
tgtgtggatggaaaagaattccgcttggcacagatctgtggtttacacatagtcatccat
gctgatgaacttgaggagctgatcagttactatcaggatcgtggctactttgaagaactg
attgcccttttggaagctgccttgggcctagagcgtgctcacatggggatgtttactgaa
cttgccatcttatactccaaattcaagcctcagaaaatgagggaacatctggagcttttc
tggtctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggca
gaacttgtattcctctatgacaagtatgaggagtatgacaatgcaataattactatgatg
aatcatcccactgatgcctggaaagaaggccagtttaaagacataattgccaaggtggcc
aatgtggagctgtactacaaagccttgcagttctacttagactacaaacctctgctgatc
aatgacctcctgcttgtattatctccacgactggatcacaccaggacagtcaattttttc
tcaaaggttaatcagctacttctagtaaagccttatctacgttcagtccagaaccacaac
aacaaaggagttaacgaagctctaaacaaccttttaacagaagaggaagatttccagggt
ttgagagcttccattgatgcctatgacaactttgataacataacgttggctcagcgtctg
gaaaagcatgaactaattgaatttaggcgtattgcagcatacttgtacaagggtaacaac
cgctggaagcagagcgtggagctgtgcaagaaagaccgtctgtataaggatgctatgcag
tatgctgcagagtccaaagatgcagagctggctgagaagctgctccagtggttcttggaa
gaaggcaagcaggagtgctttgcagcctgccttttcacctgctatgacttgctgcaccca
gatgtagtccttgagttggcatggagacataacatcatggactttgcaatgccttatttc
atccaagtgatgagagagtaccttaccaaagttgatggactattctataaggtggataaa
cttgatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaata
gtatttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaac
ttcccgtatggatacacagcaccaggattcacccagccacctgtttatggtttcaatatg
taa
DBGET
integrated database retrieval system
