Corvus cornix (hooded crow): 104688608
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Entry
104688608 CDS
T03546
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03440
Homologous recombination
ccw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104688608 (TOP3B)
03460 Fanconi anemia pathway
104688608 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccw03032
]
104688608 (TOP3B)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104688608 (TOP3B)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104688608 (TOP3B)
DNA replication proteins [BR:
ccw03032
]
Eukaryotic type
DNA Topoisomerases
104688608 (TOP3B)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104688608 (TOP3B)
FA (Fanconi anemia) pathway
104688608 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
104688608
NCBI-ProteinID:
XP_039417237
LinkDB
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Position
15:complement(8308266..8319650)
Genome browser
AA seq
862 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFLGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDFIVLWLDCDK
EGENICFEVLDAVLPVMNKTRGTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVSPEKENSLTLDWDRVRVFDREVAQMFLNITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKALLSEGINRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCVGKVVTSPGFTEIMPWHSIPLEESLPHCEKGDLFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDLCEAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
PGGRLNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtgctcatggtggcggagaagccgtccctggcgcagtccatcgccaagatc
ctctcgagagggaacatgtcctctcgcaagggactcaacggtgcatgctctgtgcatgag
tacactgggtcctttttaggacagagtgcccacttcaagatgacatctgtgtgtggtcac
gtcatgactttggatttcataggaaaatataacagctgggacaaagtggatccagcagaa
ctttttagcaaagctcccacagaaaagaaagaggctaatcccaaactgaccatggtgaag
tttttacaggtggagggaagaggctgtgattttattgtcttgtggttggactgcgataag
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgtcatgaacaaaacc
cgtggcacggagaggacgatttacagagctaaattcagttccatcaccgacacagacatc
tgcaatgccatgaatcacttgggagagcccaatcgcaatgaagctctgtccgtggatgcc
cgccaggagctggatctgaggattggctgtgccttcacaaggttccagactaaatatttt
cagggaaaatatgggaatttagacagttctctcatctcctttgggccatgtcagacccca
acacttggattctgtgttgagaggcatgacaaaatccagtcatttaagcctgagacttac
tgggtgttgcaagctaaagtgagccctgaaaaagaaaattctctcactttagattgggat
agagtgagggtatttgatcgtgaggttgctcaaatgttcctgaatataacaaagatggca
aaagaagcaaaggtagaatctgtgagtaaaaaagagaaggtgaaacagagaccactggct
ctgaacacggtagaaatgctacgagtggccagtgctgctttaggaatgggtccccaacat
gccatgcaaatagcagagcgtctttacactcagggttatattagctaccctcgaacagaa
actacccattatccagaaaactttgacctgaaaggatgtttgagacagcaagccaataat
ccttactgggcagaaactgtaaaagcactgctatcagaaggcatcaatcgtccaaggaaa
ggccatgatgcaggagaccatcctcccatcaccccaatgagagctgcaacagaagcagaa
ttaggtggagatgggtggcgactgtacgagtacataactcggcacttcattgccactgtc
agtgctgactgcaagtacctacaaaccaccatttccttcagtattggccctgaaaggttt
acctgtgtcggaaaggtggtaacttcaccagggttcacagaaattatgccatggcacagc
atcccgttagaagagagccttccccactgtgagaaaggagatctttttccgattggtgaa
ataaagttgctggaaaagcaaaccagccctcctgattacctgacagaagcagaactgatc
actctgatggaaaagcatggcattggaactgatgccagtattccagtccacattaacaac
atttgccagcgaaactatgtcacagtggagagtggtcgaagactaaagcctacaaacctt
ggcattgttctggttcatggttattacaaaatagatgcagaattggttcttcctacgatc
cgcagtgctgtagagaagcaactcaacttaatagctctgggtaaagcaaattatcatcag
gtcctggagcacacccttgatattttcaaaaggaaatttcactattttgtggattctatt
gcaggtatggatgaactgatggaagtgtctttttcacccttggctgccacaggcaaaccc
ctttcccgctgtggtaaatgccatcgtttcatgaagtatattcaggccaagccgagtcgc
ctgcactgctctcactgtgatgacacctacagtctcccccagaatggtaccattaaactc
tacaaggagttgcgctgtcccctggatgactttgagctggtgctatggtcatctggatcc
agaggaaagagctatccactgtgtccatactgttacaaccatcctcccttcagggacatg
aaaaaaggaatgggctgtaatgagtgcacccaccccacgtgccagcactcccttagcatg
cttggaattgggcagtgcgtggagtgtgagaacggggttctggtgctggactcgacgtcg
ggtcccaagtggaagatggcctgcaacaaatgcaacgtgatcgtgcacttctttgagaac
gcccacaaggtccgagtgtcgcccgagacctgcgacttgtgtgaggcggcgctcgtggac
gtggattttaacaaagccaaatctcccttacctggcgacgagacccagcattcgggctgt
gtgttctgtgatcccgtgtttcaggatctggtggagctgaaacacgcggccatgaggcac
cccatgcaccgtgggggacaagggaagaggcaagggcggggaaggggcaaaggtcggaga
cctggaggaagactcaacccaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtatga
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