Corvus cornix (hooded crow): 104688623
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Entry
104688623 CDS
T03546
Symbol
TRMT2A
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104688623 (TRMT2A)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104688623 (TRMT2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_4
Methyltransf_11
MTS
Methyltransf_15
Cons_hypoth95
RRM_1
PrmA
Ubie_methyltran
Methyltransf_32
Methyltransf_23
TRM5-TYW2_MTfase
RrnaAD
CMAS
N6_N4_Mtase
Methyltransf_18
TPMT
Methyltransf_12
UPF0020
AviRa
FtsJ
mRNA_G-N7_MeTrfase
DOT1
MetW
Motif
Other DBs
NCBI-GeneID:
104688623
NCBI-ProteinID:
XP_039416909
LinkDB
All DBs
Position
15:7317614..7324669
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AA seq
641 aa
AA seq
DB search
MAEECERCDPDRETAPVAEAGDGAQRDSQAGEDPAESPDVYRYIKGDLFTSEIYKVEIQN
LPKYIGFNDVKKFLAKYGLNPHKIKLFGKQTFAFVTFKSEEERDKAMQVLHGALWKSRHL
SVRLAKPKADPIAKKRKQEEDSEQGEAKRPAPSGEEPLSKRIADVVTPLWNVPYEEQLAQ
KKQECEQVLQKLTKEIGNNNRALLPWLFLQKQKFNKLCCPVEGVKASPLQTEYRNKCEFL
IGIGVNQEDKTVGCRLGKYKGGTCAVVEPFDTIHIPAIAKKVVKAFQDYIRSTPYSVYSP
ETYEGHWKQLTVRTSRNGHIMAIAYFNPQKLSKEELADLKISLAKYFTEGMGKSSGVTSL
YFVEEGQRKSPNLEDLPLEHVAGDKYIYEELLGLKFRISPHAFFQVNTQAAEVLYTAIGE
WVQLSQESTVLDVCCGTGTIGISLAKRVKKVIGIELCQEAVQDAKANAQINELSNIEFYC
GKAEDIVPSLMNVLAPQNLITIVDPPRAGLHSKVILALRRAEQLKKLIYVSCNPRAAMNN
FVDLCRAPSNRVKGASFRPVRAMAVDLFPQTRHCELLIFFERVEYANGSSAAAAPAAGEI
TAAACGSEGMDGISPAAREGGSQAAAGHEDTAVQERGSLNS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaatgcgagcgctgcgaccccgaccgcgaaacggctcctgtggcggaggct
ggagatggggctcagcgagacagccaggccggggaagaccccgcggagagccccgacgta
tatagatatattaagggagacttgtttacctccgagatctataaagtagagatacagaac
ctgcccaaatacattgggtttaatgacgtgaaaaagttccttgccaagtacgggctcaat
cctcacaagataaaactctttgggaagcagacgttcgccttcgtgacgttcaagagcgag
gaggagcgggacaaggccatgcaggtgctgcacggcgcgctctggaagagccgccacctc
agcgtgcgcctggccaagcccaaagccgaccccatcgccaagaaaaggaagcaagaagag
gattcggagcagggagaggcgaagcgtccggctccctccggagaggagcctctgagcaag
cggatcgcggatgtggtgaccccgttgtggaacgtgccctacgaggagcagctggcccag
aagaagcaggagtgcgagcaagtgctgcagaagctgacaaaggaaataggaaataacaac
agagctttattaccctggttgttcctgcagaagcagaagtttaataaattatgttgccca
gtggagggagtgaaagcatcacccttacagactgaatatcgcaacaaatgtgagttcttg
attgggattggtgtaaatcaagaagacaaaactgtgggttgtcgtcttggcaaatataag
ggtggtacatgtgctgtagtggagccatttgatactattcacattcctgctattgccaaa
aaagtagtaaaagctttccaagactacataaggtcaactccttactcagtgtacagtcct
gaaacctacgaaggtcactggaagcagctcacggtccggaccagccggaatggccatatc
atggcaattgcttatttcaatcctcagaaattgagtaaagaagagctagctgacctgaaa
atctctctggcaaaatacttcacagaagggatgggaaagagcagtggtgttacttctctg
tactttgtggaggaaggacagaggaaatctcccaatctagaagacttgcctttggagcat
gtggctggtgataagtacatatatgaagaactccttggtctaaaatttagaatttctcct
catgcattttttcaagtgaacacacaagctgcagaagttttgtacactgccattggggag
tgggtacaactgagccaagagagcactgtgctggacgtctgttgtgggacaggaaccatt
gggatttctttagcaaagagagtgaagaaggtaattggaattgagctctgccaagaagct
gtgcaggatgccaaagcaaatgcccagattaatgaactgagtaatattgaattctattgt
gggaaggcagaagatattgttccttccctgatgaacgttttagctccgcaaaacctgatc
acgattgtagatccgccgcgagcagggctgcattccaaggtaattcttgcccttagaaga
gctgaacagctgaagaagctcatctatgtctcctgcaatcccagagctgcaatgaataac
tttgtggacctatgccgggccccttccaacagggtgaaaggagcctctttccgccccgtg
cgagccatggctgtggatctgttccctcagaccaggcactgtgagttactgatcttcttt
gagagggtggaatatgccaacggcagctctgcagcagcagcacccgctgccggtgagatc
acagcagcagcatgtggctccgagggcatggatggcatcagcccagcagccagggagggg
gggagccaggcagctgctggccatgaggacactgcagtccaagagagggggtcacttaac
tcctga
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