Corvus cornix (hooded crow): 104688641
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Entry
104688641 CDS
T03546
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccw03037
]
104688641 (TTC28)
Cilium and associated proteins [BR:
ccw03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
104688641 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_6
TPR_19
TPR_16
TPR_NPHP3
TPR_11
TPR_9
TPR_17
ANAPC5
Motif
Other DBs
NCBI-GeneID:
104688641
NCBI-ProteinID:
XP_039417318
LinkDB
All DBs
Position
15:complement(5405996..5520227)
Genome browser
AA seq
2472 aa
AA seq
DB search
MEQQAPPPPPGAVAVGRARREQDAEPPRISFCGSKSFRRKSPDSPMLSKAEFVEKVRQSN
QACHDGDFHTAIVLYNEALGVDPQNCILYSNRSAAYMKIHQYDKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRESLEPTYQQL
QKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWS
LGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIA
MGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQE
LAEKSIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRAAEGRASSNLGIIHQM
KGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCS
RGEYVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYEEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALMDFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFVC
KRDVHGAIKFYEQQLSLAHHVKDRRLEANAYAALGSAYRMVQKCDKALGYHTQELEVYQE
LGDMSGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMN
MNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDFEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGGL
HSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYETALQYHQLDLQI
AEETNNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEESQHQLYRASAL
FETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEYYLG
DSLTENAGDFHEANSVALQTLTNSALEQHISSVREALGVDSYYTRACASSETESEAGDIM
DQQFEEMNNKLNSMTDPTGFLRMVSRNNLLNRSCQSMTSLFSSTMSPVKDGTSSLPRRQT
SFTKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYL
YERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSSSTKERVMSALTQAECVHFATHVSWKLAALVLTPNTDSNP
ASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADVLDLRLPVKLVVLGSY
QESNSKVTSDGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHAFYSSLLNGMKASAAL
GEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEILQHPERARDALRVLL
HLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLPAAVFFP
TSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINRAVKNVVGMLHQVLVQ
LQAGEKEQDFPSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQATRRT
MHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFSPTCPEGIAS
DAISVYSLSSIASSMSFVSKPENMLDGAGPRGRQDYERPKNIYPHRSAAQSQLSPQATAA
SKDEEEYEGFSIISNEPLANYQENTKPGFSPDHKQPKTSQNGGIKVSVNSKGSISTPNSP
VKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNPKLDPQELAQKILEE
TQSHLIAVERLQRSSSQISKSNSSDDGAPSPAGVSAFRSSETSAFSRPVSSSHRNQSSPL
AIKPKPPTRSSSLQKVSSGYNSPTTSEMSNREGTGQYSGQPSPGCDSHGSLTEQPPFKLK
YPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAPDIDKLKLAA
IDEKVQAIHNLKMFWQSTPHHSSGPIKILRGAPGTMTSKKDVLSLLNLSPRHSKEESAEK
LELKDLSIGQHLAASPQKIPPNGHRRPETTNAMTSAHSSPGNTLGAVRPLRLPAGNGYKF
LSPGRFFPSSKC
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaggcgccgccgcccccgccgggggccgtggcggtgggccgggctcggcgg
gagcaggacgcggagcctccccggatttctttctgtggatcaaaatctttcagaagaaaa
agtcctgacagtcccatgttgagcaaagctgaatttgttgagaaggttcgccagagcaac
caggcttgccatgacggcgatttccacactgcaattgtgctgtacaacgaggccttgggg
gtcgaccctcagaactgcattctctacagcaaccgctctgcagcctacatgaaaatccac
cagtatgacaaggccttggatgatgccatcaaagcacggctcctcaatcccaagtggcca
aaggcatacttccgacagggcgtggccctgcagtacctgggacgccatgcggatgcgctg
gccgcgtttgcgtcagggctggcgcaggatcccaagagccttcagcttctggtcggcatg
gtcgaggccgccatgaagtctcccatgagagagtccctggagcccacctaccaacaactg
cagaagatgaagctggacaagagcccctttgttgtggtgtctgtgattggccaggagctc
ctgactgcaggccaccacggggcctctgtggtggtgctagaggctgccctgaagattggc
acttgcagcctgaagctgcggggatcagtgttctctgcactgagcagtgcatactggtcc
cttgggaacacagagaaaagcactggatacatgcagcaggacttggacgtagccaagagt
ttaggtgaccagacgggagaatgccgagctcatggaaatctgggctctgcattcttctcc
aaaggaaattaccgggaagcccttactaaccacagacatcagctggtgcttgccatgaag
ctcaaggacagagaggcagcatcctcggcactgagcagtctgggccacgtgtacacagcc
atcggggactacccaaatgctctggctagccacaagcagtgtgtcctccttgccaagcag
tccaaagatgagctctccgaggcgcgggagctgggcaacatgggagcagtgtacattgca
atgggggattttgaaaatgcagtgcagtgccacgaacaacacctgaagatcgccaaggag
ctggggaacaagcgggaggaagctcgagcctacagcaacctgggcagtgcttaccactac
cgcaggaacttcgacaaagccatgtcctaccacaactatgtgttggagttggcccaggag
ctggctgagaagtccattgagatgcgagcttacgctggcctgggccacgcagctagatgt
atgcaagatctggagagggctaagcagtaccatgaagaacagttgcacattgctgagagc
ctgcaggaccgagctgctgaaggcagagcctcctccaatctaggaatcattcaccagatg
aaaggtgactacgacactgcgctgcggctgcacaagacacacctgtccatagctcaggag
ctgagcgattacgcggcccaaggccgggcctacggcaacatgggcaacgcttacaatgcc
ctcggcatgtatgaccaggctgtcaagtaccatcggcaggagctgcagatttccatggaa
gtcaacgaccgtgcttctcaggcatccacacacgggaacttggcagttgcctatcaggcg
ctgggtgcccatgaccgtgctctgcagcactaccaaaatcatctcaacattgcccgggag
ctgcgggacatccagagtgaagcgcgagccctcagcaatttgggcaacttccactgctcg
cgaggagagtacgtgcaggcggccccgtactatgagcagtacctgcgcttgtccccagag
ctgcaggacatggaaggggaggggaaagtttgccataaccttggctatgcccattattgc
ctcgggaactatgaggaagctgttaagtactacgagcaggatcttgccttagcaaaggat
cttcatgacaagctgagccaagccaaagcctattgcaacctgggcctggccttcaaagcc
ttgatggacttcagcaaagcagaggagtgtcaaaagtacctgttgtccctggcacagtct
ctgaacaattcccaggccaaattccgagctctggggaacttgggggatatttttgtctgt
aaaagagatgtacatggtgcaataaaattttatgagcagcagttgagcttagcccatcat
gttaaagacaggagactggaagccaatgcctatgcagccctgggctctgcatacaggatg
gtacagaagtgtgacaaggctttaggttaccacacacaggagctggaggtgtaccaggag
ctgggggatatgtcgggtgaatgcagagcacatggtcaccttgctgcagtgtatatgtca
cttgggaagtacaccatggccttcaagtgctacgaagaacagctggagctggggcagaag
ttgaaggaccccagcatcgaagcccaggtctacggtaacatgggcattaccaagatgaac
atgaatgtcatggaggaagcgattggctactttgaacagcagctggccatgctgcagcag
ctcagtgggaatgaatccgtgttagatcggggccgagcatatgggaacctgggagattgt
tatgaggctctgggagattttgaggaagctataaagtattacgaacagtacctgtctgtg
gctcaaagcctgaaccgcatgcaagatcaggcaaaggcctaccgaggcttgggcagtggg
cacagggctatgggaagtttacagcaggctctggtgtgctttgagaagaggcttgtagtg
gcacatgaactgggggaggcatttaacaaagcccaggcctacggggagctgggaggcctg
cacagccagctgggcaactacgagcaagccatctcctgcctggagcggcagctgaacatc
gcccgggagatgaaggaccgagccctggagagcgatgctgcctgtggccttggcggggtc
taccagcagatgggcgagtacgagaccgccctgcagtaccaccagctggacttgcagatc
gccgaggagaccaacaaccccgccggccagggccgggcctacggcaacctgggccttacc
tacgagtccttgggcacctacgagagggcagtggtttatcaggaacagcacctcagcatt
gcagcacaaatgaacgaccttgtagccaaaacggtgtcttacagcagcctggggaggacc
catcatgctttacagaactactctcaagctgtgatgtacctgcaggaaggactgaggctg
gcagagcagctgggacgcagagaagatgaagcaaaaatccgtcatggccttggcctctcc
ctctgggcgagtgggaacctggaggagtcccagcaccagctctaccgggcctctgcactg
tttgaaaccatccgacacgaggtgcagctgagcacggattacaagctgtcactcttcgac
ctgcagacgtcctcctatcaggccctgcagcgagtgcttgtcagtctgggtcaccatgat
gaggcactggcagtagcagagagaggacgaacaagggcttttgctgacctgctcgtggaa
cgtcagactgggcagcaggactcagatccctattctcccgtgacccttgaccaggtcctg
gagactgtgaatggccagaggggacttgttctttactactcactggctgcaggttatctg
tacagctggctgctggctcctggggcaggaattctgaaattccatgagtattatctgggt
gacagcctgacagaaaatgctggggacttccatgaagccaacagtgtggctctgcagaca
ctgacaaactcagcactggagcagcacatctccagcgtgcgggaggctctgggagtggat
tcctactacaccagagcctgtgctagcagtgagacagagagtgaagctggggatatcatg
gaccagcagtttgaggagatgaacaacaagctgaactccatgactgatccaaccggcttc
ctgaggatggtcagcaggaacaacctattaaacaggagctgccagagcatgaccagcctg
ttcagcagtaccatgtctcctgttaaggatggaacatcatcacttccaaggaggcagact
tctttcaccaaacccccactccgtgctctctatgacttgctgataggacccatggaagga
ggtttgatgcattccagtgggcctgttggccgccaccgtcaactgatcctggttctggag
ggagaactgtacctcattccttttgctctcctgaagggcagttcctccaatgagtacctc
tatgagcgcttcagcctcattgcagtgccgtccatccagtcactgaatcccagctccaag
tcccatgtgaggaagaatactcctgcttactccagttctacctcaatggcagctgttata
ggaaatcccaaactcccttcagcagttatggacaggtggctgtggggacctatgccctct
gcagaagaggaagcatatatggtatctgagttacttggctgccagcccctagttggcagc
tcatcaacaaaagagagagtcatgagtgccctcactcaggcagaatgtgtccattttgca
acccacgtctcctggaaactggctgctttggtcctgacacccaacactgacagcaatcca
gccagcagcaagagttcttttgggaacccctacacaatcccagaatctcttaggatgcag
gatgatgccagtgatgtggagagcatctcggactgccctcctcttcaggagttcctgctt
acagcagctgatgtgctggatctgcgtcttcctgtcaagctagtggttcttggctcttac
caagagtccaacagcaaagtcacttctgatggagtcattggcttgacaagagcattcctg
gctgctggggctcaatgtgtccttgtgtcactctggcccattcctgtggctgcttccaaa
atgtttgtgcacgccttctattcctctctgttaaacgggatgaaagccagcgcagccctc
ggagaagcgatgaaaaccgtgcagagcagcaagcagttctcccatccagccaactgggca
ggtttcatgcttattgggagtgatatgaagctgaacagcccttcttcgctggtaggacag
gccctgactgagatcctgcagcaccctgaaagggcccgggatgctctgcgtgtcctgctt
catctggtggagaaatcattgcagcgaatccagaacgggcagcacaactccatgtacacc
tcccagcagagtgtggagaataaagttggtggcattccaggctggcaggcgctcctcacg
gcggtgggatttcggttggacccgcctgccagtggcctcccagcagcagtgttcttccca
acctcagaccctggggaccggctgcagcagtgcagcaccaccatccagtccctcctaggt
ttgcctaaccctgcacttcaggcactttgtaaacttatcacagcttcagaaacaggagag
cagcttatcaacagggctgttaaaaatgtggtgggaatgctgcatcaagtcctggttcaa
cttcaggcaggcgagaaggagcaagatttcccctctgcaccaatccaggtctccatcagt
gtccagctctggaggctgcctggctgtcatgagtttctggcagctctaggttttgacctt
tgtgaagttggccaagaggaggtcattctgaaaactgggaaacaagctaccaggaggacc
atgcactttgctctacaatccttgctggcactttttgattctacagagctgcccaagcgc
cttagcctggacagttcctcatcactggagtcactggcttctgctcagtctgtttccaac
cctgtaccccagtatcaaaaccctccattctctcctacctgtccagaaggcattgcctca
gatgccatttctgtgtacagcctgagctccattgcttcttccatgagctttgtttccaag
ccagaaaacatgctggatggggcaggacccagaggacgccaggattatgagaggcccaag
aatatctatccacacaggtctgcagctcagagccagctgtcaccacaagccactgcagcc
agcaaagatgaggaagagtatgaaggtttctctataatcagcaacgagcctttggccaat
taccaagaaaacacaaaaccagggttttcccctgatcacaaacagcccaaaactagtcag
aatggaggcattaaagtgtccgtcaactccaaagggagcataagtactccaaattctcct
gttaaaatgactctcatccccagcccaaattcacctttccaaaaagttgggaaacttgca
agttctgatactggggaatctgaccagtctagcactgagactgacagcaccgtcaaatcc
caggaggacagtaatccaaagcttgatccgcaagagttggcccaaaaaattctggaggaa
actcagagtcacctcattgctgttgaacgtcttcagagaagcagcagccagatcagcaag
agcaacagttcggacgatggggctcccagcccggccggcgtgtccgcgttccgctcctcg
gagaccagcgccttcagccggcccgtcagctccagccacaggaatcaatcttcacctctt
gcaattaaaccaaagcctccaacgaggagttcatcccttcagaaggtgagctctggctat
aacagccccacaacatcggagatgtcaaacagagaaggcacaggccagtacagtgggcag
ccatctccaggttgtgattcacatgggtcgctaactgagcagcctccctttaaactcaag
taccccagctctccttatagtgctcatatttctaaatcacccagaaatatctctcccagc
tcagggcatcagtctcctggtggcagcactccatctcctgctctttcttattcctcagct
ggttctgctcgctcaagcccagctgatgccccagacatagacaaattaaaattggctgcc
atcgatgagaaagtgcaagcgattcacaacttaaagatgttctggcaaagcactccccac
cactccagtggcccaataaagattctccgaggagctcctggaacaatgacttctaagaaa
gatgtcctcagcttgctcaatttatctccacggcacagcaaagaagaaagtgcagagaag
ctggaactgaaggacctgtctattgggcaacaccttgctgcttcgccacagaagatccct
ccaaatggacacagacgccctgaaaccacaaatgccatgacatcagctcattcctcacct
ggcaatactctgggagccgtgcgtcccctgagactgccagctggtaatgggtataaattt
ttgtcaccaggaagatttttcccttcctccaaatgttga
DBGET
integrated database retrieval system
