Corvus cornix (hooded crow): 104688727
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Entry
104688727 CDS
T03546
Symbol
GTF2H3
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
ccw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104688727 (GTF2H3)
09124 Replication and repair
03420 Nucleotide excision repair
104688727 (GTF2H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104688727 (GTF2H3)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104688727 (GTF2H3)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104688727 (GTF2H3)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104688727 (GTF2H3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
TetR_C_38
Motif
Other DBs
NCBI-GeneID:
104688727
NCBI-ProteinID:
XP_039416721
LinkDB
All DBs
Position
15:complement(2456877..2461859)
Genome browser
AA seq
311 aa
AA seq
DB search
MSADDELSLLVIILDTNPIWWGKRALGEAEQFTLSKCIDAVMVLGNSHLLMNRTNKLAVI
ASHTQESRFLYPGKRWAAADPFGEGGPSMESNCSGSKDGKYELLTAINDAIAEEIKDLMT
KTEMKGQQTETLLAGSLAKALCSNVDINKMGKDLKANQEIKSRILVIKAAEDSALQYMNF
MNVIFAAQKQSILIDACVLDSDSGLLQQACDITGGIYLKVPHMPSLLQYLLWVFLPDQEQ
RSQLVLPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICSTCETAFKISLPPVM
KAKKKKLKVAA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggatgatgagctgagcctgctggtcatcatcctcgacaccaacccgatctgg
tgggggaagagggcgctgggagaggctgagcagttcaccctatcaaaatgcatcgatgca
gtgatggtgctgggaaactctcacctcctcatgaatcgcaccaacaaactcgctgtaata
gcaagtcacactcaggaaagccgtttcctgtaccctgggaagcgttgggctgctgcagat
ccctttggagagggaggcccttccatggaatctaattgctctggcagcaaggatggaaaa
tatgaattattaacagcaataaacgatgcaattgcagaagagattaaagacctcatgaca
aagactgagatgaagggccagcagacagaaaccctgttagcaggatcacttgctaaagca
ctttgttctaatgtagatatcaacaagatgggcaaagacctaaaagccaatcaagaaatt
aaatcaaggattctggtcataaaagctgcagaagacagcgcattgcaatacatgaatttc
atgaatgtgatcttcgctgcacagaaacagagtattttgattgatgcctgtgtcttggac
tctgattcaggtcttctacaacaggcctgtgatattacgggtggcatatatttgaaagtg
ccccacatgccatcccttctgcaatatttgttgtgggtttttctccctgatcaagagcag
agatcacagctcgtccttccacctcctgttcatgttgactatagagctgcctgcttctgt
catcgaaacctcattgaaattggctacgtgtgctctgtgtgcttgtcaatattctgcaac
ttcagtcctatctgcagtacctgcgagactgctttcaaaatatcattgccacctgtcatg
aaagcaaagaagaagaaattaaaggtagctgcatag
DBGET
integrated database retrieval system
