Corvus cornix (hooded crow): 104688764
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Entry
104688764 CDS
T03546
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00600
Sphingolipid metabolism
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104688764 (SMPD4)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
104688764 (SMPD4)
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
104688764
NCBI-ProteinID:
XP_039416703
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Position
15:complement(9310043..9333666)
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AA seq
827 aa
AA seq
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MAGPHLQQPSFLLATLKADCVNKPFAQRCHDLETVIEELPAKELHGIFPWLVESIFGSLD
GIIIGWNLRCLQGKTNPNEYSVALDFLDPSGPMMKLVYKLQAEEYRYDFPVSYLPGPVKA
SIQEQVLPECSLYHNKVQFPSSGGLGLNLALNPFEYYMFYFAISLITQKNSPVTHHVSPS
NSAYFILVDTYLKCFLPTEGSVLPPPSSNPGGAIPSPTPRSPAVPFSSYGMHHTSLLKRH
IAHQPSVNADPASQEIWRSETLLQIFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLSISS
KHHGSPAQSSYQALHAYQESFKPTEEHVLVVRLLVKHLHAFSNSLKPEPLSPSAHSHTAS
PLEEFKRVVIPRFVQEKLYIFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKPPQST
EPLPRSVSEKWATFIQENLLMYTKLFVGFLNRALRTDLVSPKNALMVFRVAKVFAQPNLA
EMILKGEQLFLEPELVIPHRQHRLFMSPTLGGSFLSSRSPAVTDASFKVKSHVYSLEGQD
FQYKQMFGTEVRNLVLKLAQLICQAQQTAKSISDHSAETMASPSFFSWFRFTPSDMNGSY
TGNDLDEIGQDSIKKTDEYLEKALEYLCQIFKLSEAQLTQMMMKCGTAQDENGKKQLPDC
IASENGLILTPLGRYQIINGLRRFEVQYQGDTELQPIRSYENAALVRLLFRFSSVLNERF
ADQMEVLCSREDFVGRLCRYHLTNPQLVQKIRYSPVVRDRTSQNWGPRISLRFLASYRTL
ISLLMIYFFASWFYIGPVGCTFIILIGYFLYAVIMTFFFEGWKPHEH
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccgcacctgcagcagcccagcttcctgctggccacgctgaaggcggactgt
gtcaacaaaccgtttgcgcagaggtgccacgatctggagacggtcatcgaggagctccct
gccaaggaactacatggcatcttcccatggctggtggagagcatttttggcagcctggat
ggcatcatcataggctggaatcttcgctgtttgcaaggaaaaacaaatcctaatgaatat
tctgtggctttggatttcctggatcccagtggcccgatgatgaagctggtttacaaactc
caggcagaagagtacagatatgatttcccagtctcatatcttccaggccctgtgaaagct
tcaatacaagagcaagttctaccagaatgctctttataccacaacaaagtccagtttcct
tcatctggtggtttaggtttgaatttggctcttaatccatttgaatattacatgttttac
tttgcaattagtttgattacacagaagaactcacctgtcacccatcatgtcagcccttcc
aacagtgcttatttcatcctggtggacacatacctgaagtgtttcctgcccacagaagga
agtgtccttcccccaccttcttcaaatcctgggggagccatcccttccccaactcccagg
tctccagcagtgcctttctcctcctatggcatgcatcacaccagcctgctgaaacggcac
attgcccaccagccctctgtgaatgctgacccagcttcccaggagatctggagatcagaa
acactgcttcagatctttgttgaaatgtggcttcatcattattctctggaaatgtatcag
aaaatgcagtcccctcacgtcaagctggaggttctccactaccgactcagtatctccagt
aaacaccacggtagtcctgcccaatccagctaccaggccctccacgcataccaagagtca
ttcaagcccactgaagagcacgtgctagtggtaagactgcttgtgaaacatctgcatgct
ttcagcaacagcctgaaaccagagcctctctccccttcagcccactcccacacagccagc
ccactggaggagtttaaaagggttgtgattcctcggtttgtccaggagaagctttatatc
tttctgcaacactgttttggccactggcctctggatgcctctttcagagcagttcttgag
atgtggttaagttacttgcagccttggaggtatgcacccgaaaagccaccacaaagcaca
gagcctttgcctcgcagcgtctcggagaaatgggctaccttcattcaagaaaacctactc
atgtataccaagctgtttgtgggatttctgaacagagctcttcgaacagacttggtcagt
ccaaaaaatgccctcatggtgttccgagttgctaaggtctttgctcagcccaatctagct
gaaatgatcttgaaaggagaacagttattcctggagccagaacttgttattccccaccgt
caacaccgactttttatgagccccactcttggtgggagttttttgtcatcacgatctcca
gctgttacagatgcttcatttaaggtgaagagtcatgtttacagcctggaaggacaggac
ttccagtataaacagatgtttggcacagaagtcaggaatttggtgttaaaactggctcag
ttaatttgtcaggcacagcagacagcaaagtccatatcagaccattctgcagagacaatg
gccagcccgtccttcttctcgtggtttagattcacaccatctgacatgaatggttcctac
acaggcaatgaccttgatgaaattgggcaggacagcatcaaaaaaacagatgaatattta
gagaaggcactggaatatttgtgccagatctttaagctgagtgaagcccagctgactcag
atgatgatgaagtgtgggacagctcaagatgagaatggaaaaaaacagcttccagactgc
attgcaagtgagaacggcctcattcttacacccctgggcaggtaccagatcataaatggc
ttacgtaggtttgaggtgcagtatcaaggggatactgagcttcagcccatccgcagctat
gaaaatgccgctcttgtccgcctcctgttccgcttctcctcagtgctcaacgaaaggttt
gctgatcagatggaagtgctttgctccagggaagattttgttggcagactttgtcgctac
catcttaccaacccccagcttgtacagaaaatcaggtacagccctgtggtgagggacaga
acaagccagaactggggacccaggatcagtctgaggtttctggccagctacaggactctg
atttctctgctgatgatctacttctttgcatcctggttttacattgggccagttggctgc
acattcattatcctaattggatattttctttatgctgtaataatgacttttttctttgaa
ggatggaaaccacatgaacactag
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