Corvus cornix (hooded crow): 104688792
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Entry
104688792 CDS
T03546
Symbol
XBP1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104688792 (XBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104688792 (XBP1)
04131 Membrane trafficking [BR:
ccw04131
]
104688792 (XBP1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
104688792 (XBP1)
Membrane trafficking [BR:
ccw04131
]
Autophagy
ER-phagy
ER stress-related proteins
104688792 (XBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_2
bZIP_1
bZIP_Maf
Laminin_I
KASH_CCD
DUF6262
UPF0242
Motif
Other DBs
NCBI-GeneID:
104688792
NCBI-ProteinID:
XP_039417269
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Position
15:complement(5559500..5563627)
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AA seq
419 aa
AA seq
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MSESHDGRNAGGAQPAALVTPGSVCAVLPVPLWPRCPVAAAPRLLLIPSKAAEAPGPAAA
RHLSVVLPEGXPTPASRAWRPRKPARKRQRLTHLSPEEKALRRKLKNRVAAQSARDRKKA
RMTELEQQVVELEEENQKLLRENQLLRERTCNLVRENQELRCRLGLDALKTEEEEGDKFQ
VVKESQVDEIRLVTGSAESAALRLRVSAAGAGPAVTISDSFHMDSGGSDSSDSESDLLLG
FLDSLDPEMFLRYADSESTCLEKLEEEISGETNSIPTALSPSLGSPSAKLEAINELIRFD
HVYTKPLVVEIPVEMGNQTNMLVKIEKENLSSSDDKAIPEVPVSVKKEPVDSFMPELGIS
HLLSSCHNLEASSYLLDGCSDSGYEGSLSPFSDTSSLLGTDHAWEDSFAKELFPQLISV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagccacgatggtagaaatgcgggcggggcgcagccggccgcgctggtgacg
ccgggcagcgtgtgcgccgtcctccccgttccgctatggccgcgctgcccggtggccgcg
gccccgcggctgctcctcatccccagcaaagcggccgaggctcccggccccgcggctgcc
cggcatctctctgttgtcctgccggaagganngccgacgccggcctcccgggcatggaga
ccacgcaagccggcccgcaagcggcagcggctcacgcatctgagcccggaggagaaggcg
ctgcgcaggaagctgaagaaccgcgtggcggcccagagtgcccgcgacaggaagaaggcg
cggatgacagagctggagcagcaggtggtggagctggaggaggagaaccagaagctgctg
cgggaaaaccagctcttgcgggaaaggacgtgtaacctcgtgcgggagaaccaggagctc
cgctgccgcctgggtttagatgctctgaagacggaggaggaggagggtgacaagttccag
gttgtgaaggaatcccaggtggatgagattagattggtgaccgggtccgctgagtccgca
gcactcagactacgtgtttctgcagcaggtgcaggcccagcagtcaccatttctgatagt
ttccacatggattctggtggcagtgactcttcagactctgagtctgatctcctattgggc
tttctggacagtctggacccagagatgtttctcagatatgctgattcagagtcaacgtgc
ctggaaaagctggaggaagagatctctggagaaacaaattccataccaaccgccctgtct
ccctctttggggtccccatcagctaagctggaagccattaatgaactcataaggtttgat
cacgtgtatacaaaacccctggtagtggagattcctgttgaaatgggcaaccaaaccaat
atgctagtgaaaattgagaaagaaaatctctcttcatctgacgacaaggctatccctgag
gtcccagtgtctgtgaagaaggaacctgtagacagcttcatgcctgaactgggcatttct
catctgctttcttcctgtcataatcttgaagcctcaagctacttgttggatggctgtagt
gactctgggtatgaaggatccctgtcgcccttcagtgatacatcgtctctgcttggcact
gaccatgcgtgggaggatagttttgccaaggaactctttccccagctcatcagtgtctaa
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