Corvus cornix (hooded crow): 104688796
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Entry
104688796 CDS
T03546
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104688796 (TFIP11)
Spliceosome [BR:
ccw03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104688796 (TFIP11)
Other components
Complex C specific factors
104688796 (TFIP11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
104688796
NCBI-ProteinID:
XP_039417204
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All DBs
Position
15:complement(4935912..4945726)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSDEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTPQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRINKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVSVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
IIGKRHEGKHLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggagacgatggcgtggaaatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcggcaccgccag
accaaggaggaggcgacttacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggcgggaagcgctccagggattactcggcccccgtgagctttgtcagtgctggg
ctgaggaaggcagcggccgaggagctctcggatgaggattcggatgatgatgagaagcct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttaaaaacaggtggaaat
ttcaagcccagccagaaaggctttgtgggaggctctaagtccttcgtggattttggcagc
tgggagagacacactaaaggaattgggcagaagcttctgcagaagatgggatatgtccct
ggaaggggtcttgggaagaatgctcaaggtatcatcaatcccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggtgcttatggctctgagaggaccccacagtccttgcaagac
ttccctgtggtggactcagaagaggaagctgaggaggaatttcagaaggagctcagccag
tggcggaaggacccgaacggaggcaagaaaaagcccaagtacagctataaaacagtggaa
gagctgaaagccaagggcaggatcaacaagcagctcgcagcccctcagaaggagctgtcc
caggtcaaggtgatcgacatgacaggccgggagcagaaggtttattacagctacagccag
atcagtcacaagcacaacatcccagatgacagcccccagcagcccctgggcaaggactcc
aagccccagggctttgccctgcccgagctggagcacaacctgcagctgctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctgagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtagaggagtgtgagaggcggatgcagcccggc
tgtgagaatcctctgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactacgaggagtacaggatgtcggacagggtggacctggcagtggccatagtctatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatatggcacggag
atcatagccaagtggaagagcctgctggaaaacgatcagctgttatcccacagtgggcag
gacctgtcaacagatgcttttcacagactgatgtgggagatctggatgccatatgtcaga
aacatcgtggcgcggtggcagccgaggaactgtggatccatggtggatttcttggatagc
tgggtgagcgttgttcctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaggaggtggagagctggaatccgctgacggacacggtgccaatccactcg
tggatccatccctggctgccgctgatgcaggcacggctggagccgctctactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtgttcactcctggctcatgggaggctttcatggtcaaa
aacatcgtgcctaaactcggaatgtgtctgaatgagctcatcatcaaccctcaccagcag
cacatggatgccttttactgggtgatcgactgggaggggatgatttctgtctccagcctt
gttgggctgctggagaaacatttcttcccaaagtggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaagacaagttcaatgaggctcttgacatc
atgaaccgggctgtgtcctccagcgtgggtgggtacatgcagccgggcgcccgggagaac
atcgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
atcatcgggaagcggcacgaggggaagcacctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcatcgacatggccaagtga
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