Corvus cornix (hooded crow): 104688810
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Entry
104688810 CDS
T03546
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104688810 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104688810 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104688810 (USP30)
04121 Ubiquitin system [BR:
ccw04121
]
104688810 (USP30)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104688810 (USP30)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104688810 (USP30)
Membrane trafficking [BR:
ccw04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
104688810 (USP30)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104688810 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
104688810
NCBI-ProteinID:
XP_039416811
LinkDB
All DBs
Position
15:4294983..4307720
Genome browser
AA seq
479 aa
AA seq
DB search
MRNWGVLGGAAAALAAGIYVLWGPITGRKRRRRGLVPGLLNLGNTCFLNSLLQGLSSCPS
FIRWLEEFTAQYRTEQEKSQERQYLSVTLLQLLRALSCQEVTEDDVLDASCLLEVLRMNR
WQISSFEEQDAHELFHVLTSSLEDERDRQPRVTHLFDVHSLEQPEITQKQISCRTRGSLP
PVSNHWKSQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAAVWGRPMTLDHCLHH
FISSESVKDVVCDNCTRIQAEGILNGQSIENQRTTFVKQLKLGKLPQCLCIHLQRLSWSN
QGTPLKRHEHVQFNEFLVMDIYKYRVPGPKSSQEQLSWKNSEETTPGTKDGRAGKPSDAE
QPAGTKPLFMNGASSSSSSSFLMSPGTFPLAAFPECRAPLYLYRLMAVVVHHGDMHSGHF
VTFRRAPGARSSSSSSQWLWISDESVRRASLHEVLAASAYLLFYERVHGRAQPQSPAQD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaggaactggggggtgctggggggcgcggcggcggcgctggcagccgggatttacgtc
ctgtggggccccatcaccggcaggaaacggcgccggagagggcttgtcccgggtctcctg
aacctgggcaacacgtgcttcttgaattccctgctccagggcttgtcctcctgcccctcc
ttcatcaggtggctggaggagttcacagcacagtacaggacagagcaggaaaaatcccag
gagcgtcaatacctgtcagtcactttgctgcagctcctgagagctttatcctgccaggag
gtgacagaggacgatgtcctggatgccagctgcctgctggaggtgctgaggatgaacagg
tggcagatctcctcctttgaagagcaggatgcccacgagctcttccatgtcctgacctct
tccctggaggacgaacgggatcggcagccccgtgtgacccatctgtttgatgtgcattcc
ctggagcaaccagaaataacccaaaagcaaataagctgcaggacaagaggatctcttccc
cctgtgtccaaccactggaaatcccagcaccctttccatggaaggctgaccagcaacatg
gtttgcaaacactgtgagcaccagagccctgtgaggttcgacaccttcgacagcctctcc
ctgagcattccagcggctgtgtggggtcgtcccatgacactggaccattgtctccatcac
ttcatctcctcggagtctgtgaaggatgttgtgtgtgacaactgcaccagaatccaggca
gaaggaattctgaatggacagagcatagaaaaccagagaacaacctttgttaagcaatta
aagttaggaaagctgccccagtgtttgtgcatccacctgcaaaggctgagctggtcaaac
caaggcactcccctgaagagacacgaacacgtccagttcaacgaattcctggtcatggac
atctacaaatatcgggttcctggtcccaaatccagccaggagcagctcagctggaaaaac
tccgaggagacaacacctggaacaaaggatgggagagcagggaaaccttcagatgcagaa
caaccagctggtaccaaacctctcttcatgaatggtgcctcctcttcctcctcctcctcc
tttttaatgtccccaggaactttcccacttgctgcattccctgagtgcagggccccgctg
tacctgtaccggctgatggccgtggtggtgcaccacggggacatgcactcgggacacttc
gtcaccttccggcgcgcgccgggcgcccgcagcagcagcagcagcagccagtggctctgg
atctcggatgaatccgtgcgcagggccagcctgcacgaggtgctggctgccagtgcctac
ctgctgttctacgagcgcgtgcacggccgggcccagccccagagcccggcccaggactga
DBGET
integrated database retrieval system
