Corvus cornix (hooded crow): 104688858
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Entry
104688858 CDS
T03546
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04010
MAPK signaling pathway
ccw04020
Calcium signaling pathway
ccw04148
Efferocytosis
ccw04218
Cellular senescence
ccw04310
Wnt signaling pathway
ccw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104688858 (NFATC1)
04310 Wnt signaling pathway
104688858 (NFATC1)
04020 Calcium signaling pathway
104688858 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104688858 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
104688858 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104688858 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104688858 (NFATC1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
104688858 (NFATC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
104688858
NCBI-ProteinID:
XP_039405275
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Position
2:20772852..20883489
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AA seq
944 aa
AA seq
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MPSAAPPAAAAPPSRDPSSGRERPAAAPQDGARPLGSTMKAAEEEHYNYASSNVSAGLPL
NVAHSSLSTPCHGLQTSNPVISVVPSANHPSGYGGHIDSAASEYYLPPNMRPNGAPALES
PRIEITSYMGLHHNNNQFFHDEVEEAIPNTKRSPSTATLNLPNIEAYRDPSCLSPASSLS
SRSCNSEASSYESNYSYPYTSPQTSPWQSPCVSPKTTDAEEGYQRSMVACTLLSSPRHSP
STSPRTSITEENWLGARNSRPPSPCNKRKYSLNGRQTSYSPHHSPTPSPQNSPRVSVTDD
TWLGNTNQYTSSAIVAAINALTTDSTIDMNDGIPIKSRKTAIDHTPSMTLKTEPAGEDHG
TMSPTADLSPEDFSSFQHIRKGNFCEQYLSVPQHPYQWAKPKPLSPTSYMSPSLPALDWQ
LPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLESEPLTLQLFI
GTADDRLLRPHAFYQVHRITGKTVSTTSHETILSNTKVLEIPLLPENNMRAIIDCAGILK
LRNSDIELRKGETDIGRKNTRVRLVFRVHIPQANGRTLSLQVASNPIECSQRSAQELPLV
EKQSTDSFPVTGGKKMVLTGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDKEMCKPNSLVV
EIPPFRNQRITSPVQVNFYVCNGKRKRSQYQLFTYLPANVPIIKTEPTDDYEPAQTCGPM
NQGLSPLSKPYYSQQIMMPPDPGSCLVAGFASCQQRNAVMSPSPNASPKLHDLSSSPYKC
IPNPGHSHLGLQQPTGGVPTIQEVPRSIVVHPSPPEQSSHVMLQPQVSQHLSSSCPLGYQ
QTLYPNSPSSPVPSVTQEPTYLQSCSPTHSSIMGQQQQQLPKVHRNESPTTQPLSLPELH
EESNHNLAPIPVTIKREPEELDQMYLDDVNEIIRNDLSSTNVHS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgctgccccgccggccgccgccgcgccgccgtcgcgggacccatccagcggg
agagagaggccggcggcggccccgcaggacggcgcccgcccgctcggcagcaccatgaag
gcggcggaggaagaacactataattatgcatcttcaaatgtaagtgctggcttgcctcta
aatgtggcacattcctcattgtcaactccatgtcatggcctgcagacatcaaatcccgtc
atttcagttgtcccatcggcaaaccatccctctggatatggaggacacattgacagcgcg
gcctccgaatactacctgccaccaaacatgagacctaatggagctccagcactggagagc
cccagaattgagatcacgtcttacatgggattgcatcataacaataaccagtttttccac
gatgaggtggaggaggccatccctaacaccaagcggtcaccttccactgccactttgaac
ttgccaaacatcgaggcatacagagacccgtcgtgcctcagtccagcaagtagcttgtct
tccagaagctgcaactctgaagcgtcttcctatgagtctaactactcgtatccatacact
tcacctcagacctctccgtggcaatccccgtgtgtctctccaaagaccaccgacgcagag
gagggctaccaacgcagcatggtggcctgtactttgctcagttccccaaggcactctcca
tcaacatctcctagaacgagcatcacagaggagaactggctgggggctcgcaactccagg
cctccgtctccctgcaacaagaggaagtacagccttaatggccggcagacctcctattcc
ccacaccactcccccactccttctccgcaaaactcaccgcgggtgagtgtcacggatgac
acttggctgggaaacacaaaccagtacaccagctccgccattgtcgctgccatcaatgcc
ctcaccactgacagcaccatcgatatgaatgatgggattcccatcaagtcgaggaagacc
gccattgatcacaccccatccatgactctcaaaactgaaccagctggcgaggatcatggg
accatgtcgccaactgctgatttgtcaccagaagacttctccagctttcagcacatcagg
aagggaaacttctgcgagcagtacctgtctgtgccacagcatccctaccagtgggccaaa
ccaaagcctctgtctccaacatcctacatgagcccatccctgcctgctcttgattggcag
ctgccatctcactcaggaccttacgaactacgtatcgaagtgcagccgaaatcccaccac
cgagctcattatgagacagaaggcagtcgaggggctgtgaaggcatctgcggggggccac
cccattgtgcagctccatggttacttagaaagcgagccgctcacactgcagctgttcatt
gggactgcagacgaccgcctgctgcgaccccatgccttctaccaggttcaccggatcacc
ggcaagaccgtgtccaccaccagccatgaaacaatactttccaacaccaaagtcctggaa
attccacttcttccagagaacaacatgagagcaatcatcgactgtgctgggatattaaag
ctccgaaactctgacattgagctgcgcaagggagagacagacatcggtcggaagaacaca
cgtgtgcgtctggtcttcagggttcatatcccacaagccaatggcaggaccctctccttg
caagtagcttccaaccccattgagtgctctcagagatctgcccaagaactgcctctggtg
gagaagcaaagtaccgacagctttcctgttactggagggaagaaaatggtactgactggt
cataactttctgcaagactccaaagtcatctttgtggagaaagcgccagatggtcaccat
gtgtgggaaatggaagccaaaaccgacaaagaaatgtgcaagccaaattcattggtggtt
gagataccacctttccgcaatcagagaattaccagccctgttcaggtcaacttctatgtc
tgcaacgggaaaagaaagagaagccagtaccagcttttcacctatcttcctgctaatgtt
ccaattataaaaacagaacccacagatgactatgagcctgctcaaacctgtggaccaatg
aaccaaggcttaagccctctctctaaaccgtactacagtcagcagatcatgatgccccct
gatcctggttcatgcctcgtggctggctttgcctcctgtcagcagagaaacgctgtgatg
tcaccttctcccaacgcaagccccaagctgcatgacctttcctcctctccttacaagtgc
atccccaacccgggacacagtcacctcggacttcagcagcccactggaggtgtccccacc
atacaggaagtgccaaggtctatagttgtgcacccaagcccccccgagcaatcatctcac
gtcatgctgcagccgcaggtgagtcaacatctgagcagtagctgtccccttggttatcaa
caaacactctatcccaacagtccctcttctccagttccatctgttacccaagagccaacc
tatttgcagtcctgcagtccaactcactcatccataatgggtcaacagcagcagcaactg
ccgaaggttcacagaaatgagtctccaacaacccaaccactgtcattgccagagttgcat
gaggaaagtaatcataatttggcccctattcctgtaacgatcaagcgagaacctgaggaa
ttggaccagatgtacctggatgatgtaaatgaaattataaggaatgacctttccagtacc
aatgtccactcgtag
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