Corvus cornix (hooded crow): 104688872
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Entry
104688872 CDS
T03546
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X2
KO
K22399
pachytene checkpoint protein 2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104688872 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104688872 (TRIP13)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
104688872 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
TRIP13_N
AAA_lid_TRIP13_C
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_14
AAA_18
AAA_5
AAA_25
AAA_24
RuvB_N
AAA_28
NPHP3_N
IstB_IS21
NACHT
Cytidylate_kin
ATPase_2
bpMoxR
AAA_33
AAA_30
TsaE
RNA_helicase
DUF815
ABC_tran
AAA_11
AAA_7
AAA_17
TIP49
PduV-EutP
SLFN-g3_helicase
Mg_chelatase
ATPase
AAA_19
Rad17
PhoH
AAA_3
NTPase_1
Parvo_NS1
nSTAND1
Motif
Other DBs
NCBI-GeneID:
104688872
NCBI-ProteinID:
XP_010396871
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Position
2:complement(21605454..21618201)
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AA seq
383 aa
AA seq
DB search
MDDAAGDLKRALPNVCDSVQIHVEVHQKSSSAAKKEDIRMSVLKLLNRHNIVFGDYKWTE
FDDPFLNNNVQSVSIVDTELKLKDRQPIDLSKSSLSLHIFHLNEGGPTSENLEEENEDIT
AAHHWVLPAAEFHGLWESLIYDTEVKSNLLDYVTTTLLFSDKNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELV
DDRDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLVLKEISSPPVLQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgccgctggagatttgaagcgagcgctcccaaacgtctgtgacagcgttcag
atccatgtggaagttcaccagaagtcgagcagtgcggccaagaaagaggatattaggatg
agtgtcttaaagctgttgaacagacacaacattgtgtttggtgattacaagtggacagag
ttcgacgaccctttccttaacaacaacgtgcagtctgtgtcgattgtggatacggagctg
aaactgaaggacagacagcctattgacctgagcaaaagcagtctttctcttcatattttt
catctgaatgaaggaggaccaacctctgaaaacctggaagaagagaatgaggatatcact
gcagctcaccactgggtgctaccagcagctgaattccacggcctttgggaaagtcttatc
tatgacactgaagtaaaatcaaacttactcgattatgtgacgacaacattattattttcc
gacaaaaatgttgacagtaacctgatatcgtggaacagagttgttttgctgcacggccct
cctggaactgggaaaacttctctctgtaaagcattggctcagaaactgacaattcgactg
tcatacaggtatagatatggacagttaattgagataaacagccatagccttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagatccaagagttagtt
gatgacagagatgctcttgtatttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgccttcaaggcaggcacagagccttcagatgctattcgtgtggtgaatgctgta
ctgacacaaatagaccagattaaaaggtatcccaatgtagttatcctgactacttcaaat
attacagagaaaattgacatggcctttgtagacagggctgacataaaacaatacattgga
cctccatcgactgcagcaatatttagaatatatctttcttgcctagaagaactgatgaag
tgtcaaataatatatcctcgacagcagcttctgacactcagagagctcgagatgattggc
ttcatagaaaataatgtgtcaaagttaagccttgtactaaaagaaatctcaagtccccca
gtgttacaatga
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