Corvus cornix (hooded crow): 104688955
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Entry
104688955 CDS
T03546
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
ccw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104688955 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
104688955 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104688955 (MNAT1)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104688955 (MNAT1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104688955 (MNAT1)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104688955 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
DUF3292
zf-UDP
Motif
Other DBs
NCBI-GeneID:
104688955
NCBI-ProteinID:
XP_039407725
LinkDB
All DBs
Position
5:5351371..5470600
Genome browser
AA seq
309 aa
AA seq
DB search
MDDLGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCHECDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKREEDFPTLDEYNDFLEEIEEIVFNLTNNVDLENTRK
KMELYQKDNKEVIQKNKLKLTREQEELEEALEVERQESEQRRLFMQKEEQLQQMIKRKNK
QALLDDLESSDLPASLLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQHISLAPIQK
LEETLYEYQPLQVETYGPQVPEPEMLGRLGYLTHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWHPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgggctgcccgcggtgtaagaccaccaagtaccgcaacccgtccctgaag
ctgatggtgaacgtctgcgggcacacgctatgcgagagctgtgtggacctgctgtttgtg
agaggggctgggaactgccacgagtgtgatacccccctgaggaagagtaacttcagggta
cagctctttgaggatcctgctgttgacaaggaagtggaaatccggaagaaagtgctgaaa
atatacaataaaagagaggaagactttcccactctagatgaatataatgatttcttggaa
gaaatagaagaaattgtatttaacttgaccaacaatgtggacttggagaacaccagaaag
aaaatggaactgtatcaaaaggataacaaagaagtcattcagaagaataagttaaaactg
acgcgggagcaggaagagctggaggaggctctggaggtggagcggcaggaaagcgaacaa
aggcgactgttcatgcagaaggaagaacagctacaacagatgataaaaaggaagaataaa
caggcactcctggatgatctggagagctctgatcttcctgcctctctgctcttagctcag
cataaggacagatctactcagctagaaatgcagctggaaaaacccaaacctgtcaaacca
gtcacgttttccactggcatcaaaatgggtcagcatatttcattagctcccattcaaaag
ttagaggaaactttgtatgaatatcagcctctgcaagtggagacatatggaccacaagtt
ccagagcctgaaatgctgggaaggctggggtacctcacccacgttcgagccgcctctcca
caggacctggccgggggctacacgtcctccctggcttgtcaccgcgccctgcaggacgct
ttcagcgggctcttctggcaccccagttag
DBGET
integrated database retrieval system
