Corvus cornix (hooded crow): 104689119
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Entry
104689119 CDS
T03546
Symbol
ABCB5
Name
(RefSeq) ATP-binding cassette sub-family B member 5 isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104689119 (ABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104689119 (ABCB5)
Transporters [BR:
ccw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
104689119 (ABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
Rad17
AAA_5
AAA_28
AAA_30
G-alpha
AAA_29
Zeta_toxin
AAA_15
DUF2207_C
UL45
Motif
Other DBs
NCBI-GeneID:
104689119
NCBI-ProteinID:
XP_010397354
LinkDB
All DBs
Position
2:complement(48355266..48389817)
Genome browser
AA seq
1312 aa
AA seq
DB search
MKGNLENSTEQDLSNPESGSKGCDDPSFQHEEHVEQSDQLKPKRKMKGDEKTEKQMVGIL
ELFCYADGVDILLMVVGLVAAAANGTGMPLMIIIFGEMTNSFVLSGVESNDTSGNSSSCP
SDPGVDIEGEMTKFAYYYVGIGFAVLVLSIIQVWTFLVAATRQTARIRQKFFFAVLHQEM
AWFDTTQIGTLNTRLTDDINTIREGIGDKISIFLQFFSTFVSGLIIGFIYGWKLTLVVMS
VSPLLAASTAVWSTLLASLTAKELSAYAKAGAVAEEILTAIRTVVAFNGQQKALEKYDAN
LEMAKSVGMKKSITTNTCLGVSQFFIFGSYALAFWYGTKLTAEDPHYDIGRVLIVFFSVL
VGAFSLGQAAPNLESVANARGAAYEVYKIINKKRLIDSSSKEGYKPDKLIGQIEFRNIHF
SYPSRPDVKILKGLNLKVQTGKTIALVGASGCGKSTTVQLLQRFYDPDQGEITLDGRDIR
TLNTKWLRENIGIVSQEPVLFATTIAENIRYGREDISDAEIEQAAKEANAFDFISRLPDK
FNTMVGERGAQLSGGQKQRIAIARALARNPKILLLDEATSALDTQSESIVQAALDKARAG
RTTIVIAHRLSTIRTADTIAGFEKGIVVEQGTHSELMLQKGVYYSLVMQQGCSSDVQDYG
TSEDSEVTEAEEYEENINPVEELTLQNNFEGSVISGRGNIRRRSSRYKSKRSSSKNPFGK
KKKKMEVEEENLPAVPYLKILALNKPEWFYVLLGVIAAAVIGAVHPAFAVIFGKIIGAFQ
ERDPEKRSKNTVLLSLIFLLLGVIILAAYIIQGFMFGKSGEMLTMRLRSLSFRALLQQEI
GWYDDQKNAVGVLLTRLATDASQVKGATGSRLALMTMTVFTLATAIIIAFVYGWQLTLLI
LACIPFIVGANAVSASSMSGHAAEDQKALEEAGRISTESVENIRTVASLTREEIFYERYI
SSLNRTYRKSLKKAPFYGFTYGIAQCSEYFINAAVFRFGAWLIANCLTNFENVFIVFSSV
IFAAMNVGQSASLAPDYGKARMSAQRIFKLLERKPLIDSYSDEGEKLSHFEGNIEFRNIH
FVYPTRPEVQVLQGLSVKVNKGQTLALVGSSGCGKSTSIQLLERFYDPVEGQVVADGFDT
RSLHLQWLRSRLGLVSQEPILFDCSIAENIQYGDNSRVISQEEIEEAAKAANIHAFIEKL
PEKYNTRVGEKGTQLSGGQKQRIAIARALVRNPAVLLLDEATSALDTESEKIVQKALDNA
RQGRTCIVIAHRLSTVQTADIIVVIQNGRVVEQGTHSQLLAKEGHYYALVNA
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaatttggaaaattccacagaacaggacctctccaatcctgaatctggaagc
aaggggtgtgatgatccttctttccagcatgaagaacatgtagaacaaagtgaccagtta
aagcccaagaggaaaatgaagggagatgagaagacagagaaacaaatggttggcattctt
gaattgttttgctatgctgatggggtggatatcctgttgatggtagttggtttggtggca
gcagctgcaaatggaactggaatgccacttatgatcattatctttggagagatgacaaac
agctttgtgctcagtggcgtggaatccaatgatacttcaggaaacagttccagctgtcca
tcagatccaggtgtggatatagaaggtgaaatgacaaagtttgcttactactacgtggga
attggctttgctgtgttggtcctgagcatcatccaagtgtggacatttttggttgctgct
acaaggcaaacagcaaggatccggcagaagttcttttttgcagtgctccatcaggagatg
gcttggtttgatactacccaaataggaacactgaacaccagactgacagatgacatcaac
accatccgtgaaggtatcggagacaagatcagtatattcctgcagtttttttccacgttt
gtgtcagggcttattataggattcatctatggctggaagctgacactggtggttatgtca
gtcagcccacttcttgctgcatcgacagcagtttggtcaactctcctggcatccctcact
gctaaagagctgtctgcttatgccaaagcaggagctgtggcagaagaaattttgacagca
atcaggactgttgtggctttcaacggacagcaaaaggcattagagaaatatgatgctaac
ttagagatggctaaaagtgttggaatgaaaaaatccattaccactaacacatgtctaggt
gtttcacaatttttcatctttggatcctatgcccttgcattttggtatgggaccaagctc
actgctgaggatccacattatgacatcggccgtgtgttaattgtgttcttctctgtgctt
gttggagctttctccctgggccaggcagctcccaacctggagagtgtggctaatgcacgt
ggggctgcctatgaagtgtataagattatcaataagaaacggctcatagatagcagttct
aaggagggttacaagccagacaaactcataggacaaattgaattcagaaatatccatttc
agctacccttccagacctgatgttaaaatcctcaaaggtctaaacttgaaagttcaaact
gggaagaccattgctttagttggtgccagtggctgtggaaaaagcactactgttcagttg
ctgcagagattctatgatcctgaccagggagaaattaccttagatggtcgggatattcgg
acccttaacacaaagtggctacgagaaaatattggcattgtgagccaagagcctgttttg
tttgcaaccacaatagctgagaacattcgctatggcagagaagacatctctgatgctgaa
attgagcaagcagccaaggaagccaatgcttttgactttatatctagactccctgataaa
tttaacaccatggtgggtgaaagaggggctcagctgagtggaggacagaagcagcgaata
gctattgcccgtgccctagcaagaaatcccaaaattcttcttctggatgaagctacatct
gcattagatactcagagtgaatccatagtgcaagcagctcttgataaggctcgggctgga
cgtaccaccattgtgattgctcacagactgtctaccatcaggactgctgacactattgct
ggatttgagaaaggcatcgtggttgaacaagggacgcacagtgaactgatgttgcagaaa
ggagtctactattcccttgtaatgcagcagggttgtagcagtgatgttcaagattatggc
acatcagaagatagtgaagtcacagaagctgaggaatatgaggaaaacataaatcctgtg
gaagagctgactcttcaaaataattttgaaggatctgtgatctcaggaagaggcaacatt
cgaagaagatccagcagatataagagcaagaggagttcatctaaaaatccctttggaaaa
aagaagaaaaaaatggaggtggaggaagaaaatctccctgctgtgccttacttaaaaatc
ctggctctgaacaaacctgagtggttctatgtactgctgggagtgattgctgccgctgtc
ataggtgcggtccatcctgcattcgctgttatatttggaaaaattattggggcttttcaa
gaaagagatccagaaaaaaggagtaaaaacactgtgctgctttctttaatatttctttta
cttggagtgattatcttagcagcatacataatccaaggattcatgtttgggaagtctggg
gaaatgctaacaatgagactgcgctccttgtccttcagagcattacttcagcaggagatt
ggatggtatgacgaccagaaaaatgctgttggtgttctgttaactcgtcttgctacagat
gcttcccaagttaaaggcgcaactggaagccgtcttgcactgatgactatgactgtcttt
accctcgcaactgccatcattattgcatttgtatatggctggcagctgactttgcttatc
ctggcctgcattccttttattgttggtgcaaatgctgtgagtgctagctctatgtctggt
catgctgcagaagaccaaaaagctttggaagaggctggaagaatttcaacagaatcagtt
gaaaacataagaactgtagcttcactgaccagggaagaaatattttatgaaagatatatt
tctagtttgaatcgtacatatagaaaatctctgaaaaaagcccctttctatggatttacc
tatggaatagctcagtgttcagagtactttattaatgcagcagtcttcagatttggggca
tggctcattgctaattgtctgaccaactttgaaaatgtgtttatagtcttctcttctgtc
atatttgcagctatgaatgttggtcagtctgcttccctggcaccagactatggcaaagct
cgaatgtcagcccaaagaatctttaaacttttggaaagaaaacctctaattgacagttac
agtgatgaaggtgaaaaattgagccattttgaaggcaacattgaattcagaaacatccat
tttgtatatccaacaaggccggaagttcaggttttgcaaggactcagtgtgaaggttaac
aaaggacagactctggcattagtaggaagcagcggctgtggcaaaagcacatccattcag
ctcctggagagattttatgaccctgtggaaggacaagtggtagcagatggatttgatacc
agatctctgcatttacaatggctgaggtcccgactgggcctagtgtcacaggagcccatt
ttgtttgactgcagcattgctgaaaatatccagtatggagacaatagtagggtgattagt
caggaggaaattgaagaagcagctaaagcagcaaatattcatgccttcattgaaaaactg
ccagagaaatataatacccgggtgggtgagaaaggaacacaactttctggaggtcaaaaa
caaagaatagcaattgcccgtgctctggttcgtaatcctgctgttctgctcctggatgaa
gctacctctgctcttgacacagaaagcgaaaagattgtccagaaagctctggataatgcc
cggcaaggtcggacctgcatcgtcatcgctcatcgactgtccaccgtgcagacagccgac
atcatcgtggtgatccagaatggcagggtggttgagcagggcacccacagccagctactg
gcaaaggaagggcactactatgcccttgtaaatgcataa
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