Corvus cornix (hooded crow): 104689124
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Entry
104689124 CDS
T03546
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104689124 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104689124 (SNX13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
104689124
NCBI-ProteinID:
XP_019141276
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All DBs
Position
2:49460587..49528473
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AA seq
979 aa
AA seq
DB search
MEGFRPEAARQLVCETSLSIWGWGSLGLVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLL
FGKSNSEKYLEQCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQ
FSLRDYVQYWYYTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHL
RVFRKAQQRIAEKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCE
VLLYILLPPGDFQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEA
FMNIIKLSDNIGELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQ
RLQSGKEIDTVKLAANFGKLCTVPLDHILVDNVALQFFMDYMQQIGGQAHLFFWMTVEGY
RVTAQQQLEVLQSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLA
ETLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDD
GEGESFNGSPTGSINLSLDDLSNVPSDETVQLHAYISDTVYADSDPYAVAGVCNDHGKTY
ALYAITVHRRNANGEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREF
LEKRKKDLNAYLQLLLNPEVMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRN
SMRNVSNAVKSIPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCR
VAAPIDDNADDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIV
DHVDWMTSPEQVADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDEL
KHIIGAETTRKGILRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFNKLHSRSKQ
MQRYKQRLHSTQAPSLQKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggagggtttccgtcccgaagcagcccggcagctcgtctgtgagaccagtctttccatt
tggggatggggaagtcttggccttgtgctttttctagtaacttttggacccttcgctata
ttttactttgcattttatatcctctgctttgtgggtgggggttttgtggttactctttta
tttggaaaaagcaattcagaaaaataccttgagcagtgcgaacattcgtttctcccttgt
acatcagttgggatccctaagtgcatagaagaaatgaaacgtgaagccagacctattaaa
attgacagaagactgacaggtgcgaacataattgatgagcctttgcaacaggtaatccag
ttttccctgagagactatgtgcagtattggtattacacgctaagtgatgatgaatccttt
cttctggaaattaggcaggctcttcagtatgcacttgttcagttttctgccaggtcaaag
gaaacagactggcagccttatttcactacacgacttgttgatgactttggcactcatctt
cgagttttcagaaaagctcagcaaaggatagcagagaaaggtgatcagatgaaagatcaa
gctgaggaacttgtagatacattctttgaggttgaagttgaaatggaaaaagaagtctgt
cgtgatctagtctgcacttctcccaaagatgaagaaggattcctaagggatctgtgtgag
gttttactgtatatattgctacctcctggagacttccagaacaagatcatgcgatacttt
gtcagggaaatcctctcccgaggaattcttcttccattaataaaccagctcagtgatcct
gattatattaatcagtatgtcatatggatgattcgtgattccaactgtaactatgaggcc
tttatgaatattattaaattaagtgataatataggagagttggaagcagtgaaagataaa
gcaagtgaagagctgcagtatcttcgatctctagatacagcgggagatgatatcaacact
ataaaaaatcaaataaacagtttattatatgttattaaagtatgtgattcaagaattcag
aggttgcagtcaggaaaagaaatagatactgtgaaactggcagcaaactttggaaaactt
tgcacagtccctctggaccatattctggtagacaatgttgcactacagttttttatggat
tacatgcagcagattggtggccaagcacatctgtttttctggatgacagtggaaggatac
agggttacagcacagcaacagctggaggtacttcaaagccggcagaaagatggaaaacat
cagactaatcagaccaagggtctattaagagcagctgcatttggagtttatgagcaatat
ttatcagaaaaggcatctccaagagttaatattgatgacaacttagtagcaaaacttgca
gaaacactgaaccatgaggatccaacacctgaaatctttgatgacattcagagaaaggtg
tatgagttgatgctgcgagatgagaggttctacccttcgttcaagcagaatgtgttgtat
gtgcgtatgttagccgagctggatatgctgaaggatcccagtttcagaggatcagatgat
ggtgaaggagaatcttttaatgggtctcctactggcagcataaatctgtccttagatgac
ctttcaaatgtcccttctgatgagacagttcagctccatgcatacatctcagatactgtc
tatgctgactctgacccatatgccgtggcaggagtgtgtaatgaccacggcaagacatac
gccctgtatgccatcactgtccaccgacgaaatgcaaacggtgaggagatgtggaagaca
tatcggcgctacagtgacttccatgacttccacatgaggatcactgagcagtttgaaaac
cttgcaaatatactaaaacttcctggcaaaaaaacatttaacaatatggacagagagttt
ttggaaaagaggaaaaaagatttaaatgcttatttgcagctcttgttaaatcctgaagtg
atgaaagcttctccagctttagcccattatgtgtatgacttcctggagaataaagcctac
agcaaagggaagggggattttgcacggaagatggacacatttgtaaatccactgcgtaac
tctatgagaaatgtatcaaatgcagtcaagtctatccctgacagcctggcagagggaatg
actaaaatgtcagacaacatgggtaaaatgtcagagagattgggacaagacataaagcaa
tcatttttcaaggtgccgcctctgatgcagaaaacctattcagatccagaccattgccgt
gttgcagcaccaattgatgacaacgcggatgacaatattcccctgagagtaatgctccta
cttatggatgaagtcttcgatttaaaggagagaaatcagtggttaagaagaaatataaaa
aatctgcttcagcaacttattagagcaacatatggcgacacaattaatagaaaaatagtt
gatcatgttgattggatgacatctcccgagcaagtagcagatgcagtgaaacgcttcaga
gatgctttttggcccaatggcattttagcagagactgttccacgaagggacaaagctatt
agaatgagaacaagagtggcagggaagaccaaattactggaggtgatgccagatgaactg
aagcacatcataggcgctgagactacacggaaaggcatccttcgggtctttgaaatgttc
cagcatagtcagctgaataagagaatggtgtatgtgtttctggagagattcctcgaaacc
ttatttccacaaaataagtttcctgagctcttcaacaaactgcattcaaggtcaaagcaa
atgcagaggtataagcagagactacactctactcaagcgccttccttacagaaaaggtga
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