Corvus cornix (hooded crow): 104689125
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Entry
104689125 CDS
T03546
Symbol
EXO1
Name
(RefSeq) exonuclease 1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104689125 (EXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccw03032
]
104689125 (EXO1)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104689125 (EXO1)
DNA replication proteins [BR:
ccw03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
104689125 (EXO1)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
104689125 (EXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
104689125
NCBI-ProteinID:
XP_010397390
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All DBs
Position
3:46995253..47016281
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AA seq
803 aa
AA seq
DB search
MGIQGLLQFIKEAAEPSHVKKYKGLTVAVDTYCWLHKGAYACAEKLARGEPTDIYVAFCM
KLVHMLLSFGIKPILVFDGCTLPSKKEVEKARREKRQASLLKGKQLLQEGRLSEARECFG
RSVNITHAMAHEVIKAARAQGVDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGCK
KVFLKIDKFGNGLEIDQARLGKCKQLGNVFTEEKFRYMCILSGCDYLPSIHGIGLAKACK
LIRLANNPDIIKVIKKMGQYLKMNITVPEEYIQGFTRANNTFLYQLVFDPVNRKLVPLNA
YGDDIDPETLTYAGRHVGDDTAFQIAIGNIDIGTMEQIDNYSPDTAQPVQQRSCGWNDRR
DNRVNSIWSTEYKFGPTEDTAPPKMHFPEKPTTKGMEKIISVKGLKLAGKELLAKRPRSD
SEEISDGDLLKQYSFSKTKRIKKESDDGQAQRSVSAIQSLDSPGNSITQESSNSLPRVRN
KFASFLQRKNKEKDVVIVPGTRSRFFCNDAVTFDSTAKKDDGDLTRDAEQDCQKQETKHV
ADDVSRFSESEKSSRTVFKPPGEMQKSCFQWFSSLESNSGSLGPSHTVFSQQFHQQRNNC
IVTQEDQINGAVCDESEEESSPLIELEQSSQSQGSCEPSECSLESSEILQVSSSSGAKES
DSSSKLDDDRCVLSPLFSAVQTGKKNTVIKTKVPGLRKSSNTRSHMVTKLKTLIPAKVSG
LSRKLSPLQKRKDCDTENKLGLQSTIGELWKSFQFKREYEKLPSCRKSDPLSPIKDNIQL
TPETEEEIFNHLERSHVQRAIFQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggggatccagggcctgctccagtttatcaaggaggctgccgagccttcccacgtgaag
aaatacaaagggctgacggtagctgtggacacctactgctggctgcacaaaggcgcctat
gcttgtgctgaaaagctggcccgaggagagcccacagatatttatgtagctttctgtatg
aaacttgttcatatgctcctctcatttggaattaaaccaattttggtatttgatggatgt
accctaccctctaagaaggaagtggaaaaggcacgacgagagaagcgtcaagccagtctc
ctgaaggggaaacaattgttgcaggaagggagactgtcagaagctagggaatgttttggg
cgcagtgtaaatattacccatgctatggctcatgaagttattaaagctgcacgagcccag
ggagttgattgtattgttgctccttatgaagcggatgctcagctggcttatcttaataag
acaggcatggttcaagctataattacagaagactctgatctcttagcttttggatgtaaa
aaggtgtttctgaaaattgataagtttggaaatggactagagatagatcaagctcgacta
ggaaaatgtaagcagcttggaaatgtatttacagaagagaaattccgctatatgtgtatt
ctttctggctgtgactacctcccatcaattcatggaattgggttagctaaagcatgcaag
ttaataagattagccaacaatccagatattataaaggttattaagaaaatggggcagtac
ttgaagatgaatataacagtaccagaagaatacatacagggttttacacgagctaataat
acattcctgtatcagttagtttttgatcctgtcaacagaaaattagttcctctgaatgca
tatggagatgatattgatccagaaacactaacttatgcaggacgacatgttggtgatgat
actgcttttcaaattgccattggcaacattgatatcggtacaatggagcaaattgataac
tacagccccgacacggcacagcctgtgcagcagagaagttgtgggtggaatgaccgacgt
gataatcgtgtaaatagcatttggagcacagagtacaagtttggccccactgaagatact
gctcctcctaaaatgcatttcccagagaaaccaacaaccaaagggatggagaagataatt
agtgttaaaggactaaagcttgcaggcaaagagctcttggcaaaaaggccaaggagtgat
tcagaagaaatctcagatggagatctgttgaagcaatactcgttttcaaaaacaaaaaga
atcaagaaggagagtgatgatggtcaagcacaaaggagtgtgtcagcaatacaaagcctt
gattctccagggaattccatcactcaagaaagctctaattccttgcccagagttagaaat
aaattcgcttcctttttacaaaggaaaaacaaagagaaggatgttgtaattgttccagga
acaagaagcaggtttttctgcaatgatgcagttacatttgacagtacagcaaagaaggat
gatggtgatctaactcgagatgctgagcaggattgccagaaacaggaaacaaaacatgta
gcagatgatgtttctaggttttcagaaagtgaaaaatcatcaaggactgtctttaaacct
cctggagaaatgcagaaaagttgtttccagtggtttagcagcctcgaaagtaactcagga
agtcttggtccatctcatactgtattttcacagcagtttcaccagcagagaaacaactgc
attgtaacccaggaagatcagattaatggggcagtgtgtgatgaatcagaggaagagtcc
tcccccttaatagaactggaacagtcatcccagtctcaagggtcttgtgagccatcagaa
tgcagtttggagtcttcagaaatcctgcaagtgtccagcagctcaggtgcaaaggagtct
gattccagttcaaaactggatgatgatcgatgtgttctgtctccactattttctgctgtt
caaactggaaaaaaaaatacagtcataaagaccaaggttcctggattacgtaaatccagt
aatacaaggtcacatatggtaacaaagctcaagacattgataccagctaaagtaagtgga
ctaagcaggaaactgtcacctctgcagaagagaaaggactgtgatactgaaaataagctg
ggactgcaatccactattggtgaactctggaaaagcttccaatttaaaagagagtatgaa
aaacttccttcttgtagaaagtcagatcctctgtctccaatcaaagataatatacagctc
actccagaaacagaagaagaaatctttaatcatctggaacgtagtcatgttcagagagct
atattccagtga
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