Corvus cornix (hooded crow): 104689209
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Entry
104689209 CDS
T03546
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104689209 (TRDMT1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
104689209 (TRDMT1)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104689209 (TRDMT1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
104689209
NCBI-ProteinID:
XP_010397547
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Position
2:complement(59192513..59237944)
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AA seq
400 aa
AA seq
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MAALRVLELYSGIGGMHQALRESCTYAEVVAAVDVNTLANDVYKHNFPNTPLWAKTIEGI
TLQEFDRLSFDMILMSPPCQPFTRIGLQGDVADPRTKSFLYILDILPRLQKLPKYLLLEN
VKGFESSSARNELLQTLTTCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHHEPFSFQSPG
QILTRFPDQDPEDLLKEKVADEVGETSFSLSSEEKNLDPNIGPDCSSKKNLPKGAFLFKL
ETVEEMERKCDQDNDSSIQMLKDFLEEENEEMSQYFLPPKSLLRYAFLLDIVKPTCRRST
CFTKGYGHYVEGTGSVLQTAVDVELESVFKHIDNLPEEEKLMKLSTLKLRYFTPREIANL
HGFPLEFGFPEKVTVKQCYRLLGNSLNVHVVAKLISILLE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcgggtgctggagctgtacagcggcatcggcgggatgcaccaggccctc
agagaaagctgcacatatgcagaagttgttgctgctgttgatgtgaacactcttgccaat
gacgtttataagcacaactttcccaacacgccgttatgggcaaagactattgagggcata
acactgcaggagtttgacagattatcttttgatatgattttgatgagtcctccctgtcag
ccatttacaagaattggcctgcaaggtgatgtagccgatccacggacaaagagctttctc
tatatccttgatattctcccaaggcttcagaagcttccaaaatacctacttttagaaaat
gttaaaggatttgaatcctcttctgcaagaaatgaacttttgcaaacactaacaacatgt
ggatttaaatatcaggaatttctcttatctccaacttgtcttggcattcccaattctagg
ctgcggtattttctaattgcgaagcttcaccacgaaccgttttcctttcagtctcctggc
caaatattgacaagattcccagatcaggatccagaagatttactcaaggaaaaagttgcc
gacgaagtgggtgaaaccagtttttctttgtcctctgaggagaagaatctggatccaaat
attggtccagattgcagcagcaagaagaatttaccaaaaggggcctttctatttaagctt
gaaacagtagaagaaatggaaaggaaatgtgatcaggataatgattcctctattcaaatg
ctaaaagacttcttggaagaggaaaatgaagaaatgagtcagtatttcttaccaccaaag
tccttattgcgctatgctttcttgttagacattgttaaacccacctgccggagatccaca
tgctttacaaaagggtatggacactatgtagaagggacaggctcagttctgcagacagca
gtagatgtagagcttgaatcagtgtttaagcatattgacaacttaccagaagaagagaag
cttatgaaattgtcaacactaaaactgaggtactttaccccaagagaaatagcaaatctt
catggattccctttggaatttggttttcctgaaaaggtaacagtaaagcagtgctatcgt
cttctgggaaacagcctcaacgtacacgtggtggcaaaattgatctccattctacttgaa
taa
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