Corvus cornix (hooded crow): 104689387
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Entry
104689387 CDS
T03546
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X3
KO
K09364
POU domain transcription factor, class 2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104689387 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104689387 (POU2F1)
03021 Transcription machinery [BR:
ccw03021
]
104689387 (POU2F1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
104689387 (POU2F1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
104689387 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
HTH_31
Motif
Other DBs
NCBI-GeneID:
104689387
NCBI-ProteinID:
XP_010397772
LinkDB
All DBs
Position
1:complement(4568756..4682759)
Genome browser
AA seq
778 aa
AA seq
DB search
MLDCSDYVLDSRMNNPSETSKPSMESGDGNTERERGSDLGKYIGDAERCLRDHSAGTQTN
GLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQP
SQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQLLAAAVQHSASQQHS
AAGATISASAATPMTQIPLSQPIQIAQDLQHLQQLQQQNLNLQQFVLVHPTTNLQPAQFI
ISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLASQPATPTRTIAATPVQALPQS
QSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTIS
RFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLSSPSALNSPGQGIEGLNRRRKKRTS
IETNIRVALEKSFLENQKPTSDEIAMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGT
SSSPIKAIFPCPTSLVATTPSLVTSSAATTLTVNPVLPLASPAVTSLSVTGTTETTSNNT
ATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVT
ASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPGLMASSQFAAGGALLSLNPGTLGGA
LSPALMSNSTLATIQALASGGSLPITSLDATGNLVFANAGGTPNIVTAPLFLNPQNLSLL
TSNPVSLVSAAAASAGASGPVASLHATSTSAESIQNSLLTVASASGATSTTTTASKAQ
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgctggactgcagcgactacgttctagactcaagaatgaacaatccgtcagaaaccagt
aaaccatcgatggagagtggggacgggaacacagagagggaaagagggagcgacctggga
aaatacattggtgatgctgagagatgtctccgagatcacagtgcaggcacgcaaacaaat
ggcctggactttcaaaagcagcctgtgcctgtcggaggagcaatctctacagcccaggcc
caggccttccttgggcaccttcatcaggtccagctcgctggaacaagtttacaggctgct
gctcagtccttaaatgtacagtctaaatctaatgaagaatctggggactctcagcagcca
agccagccttcccagcagccttcagtgcaggcggccataccccagacccagctcatgctg
gccggaggacagatcaccgggctcacgttgacgccagcccagcaacagttattgctccaa
caggcgcaggcccagttgctggcggctgcagtgcagcactcagccagtcagcagcacagc
gctgctggtgccaccatctcggcctctgctgcgacgccgatgacgcagatccctctatct
cagccaatacagattgcacaggatttgcagcacttgcagcagcttcagcagcagaatctc
aacctgcaacagtttgtgttggtgcatccaacaaccaacttgcagccagcacagttcatc
atctcacaaacgccgcaggggcagcagggtctcctgcaagcgcagaatctcttaacgcaa
ctacctcagcaaagccaagccaacctcctgcagtctcagccaagcatcacccttgcctcg
cagccagcaaccccaacacgcacaatagcagcgacccccgttcaggcacttccacagagc
cagtcaacaccaaagcgaatcgacactcccagcttggaggagcccagtgaccttgaggag
cttgagcagtttgccaagactttcaaacaaagacggatcaaacttggattcactcagggt
gatgttgggctcgctatgggcaaactctatggaaatgacttcagccaaactaccatctct
cgctttgaagccttgaacctcagctttaagaacatgtgcaagttaaagccacttctggaa
aagtggctcaatgatgcagaaaacctctcatctgattcaactctctccagcccaagtgcc
ctgaattctccagggcaagggatcgaaggcttgaaccgtaggaggaagaaacgcaccagc
atagagaccaacatacgtgtggccttagagaagagtttcctggagaaccaaaagcctacc
tcggatgagatcgccatgatagctgaccagctaaacatggagaaggaggtgatccgcgtt
tggttctgtaaccggcgccagaaggagaaaaggatcaacccacccagcagtggtggaacc
agcagctcgcccatcaaagcaattttcccttgtccaacctcactggtggcaaccacacca
agccttgtgactagcagtgcagctacaaccctgactgtcaaccctgtgctccctctggcc
agtcctgctgtcaccagtctgtcagtcacaggcacaacagaaaccacctccaacaacacg
gcaacagtgatttcaacagcacctccagcttcttcagcagtgacatcaccctccctgagt
ccttccccttctgcctcagcctccacttcagaggcatccagtgccagtgagaccagcaca
acacagacaacctccactcccttgtcctcccctcttgggaccagccaggtgatggtaacg
gcatcagggttgcaaacagcggcagcggccgcgttacaaggagctgcacagttgcctgca
aatgcaagtcttgctgccatggctgctgcagcaggactaaacccaggcttgatggcatcc
tcgcagtttgcagctggaggtgccttactcagcctcaatccagggacattaggtggtgct
ctcagcccagccctgatgagcaacagtacactggcaactattcaagctcttgcatctggt
ggctctcttccaataacatcactggatgcaactggaaacttggtgtttgccaatgctgga
ggtacccctaacatcgtcactgcccctctgttcctgaaccctcagaacctttctctgctc
accagcaacccagttagcttggtctctgcagctgcagcctccgcaggggcctctggacca
gtcgccagccttcacgccacctccacctcagccgagtccatccagaactctctcctcacg
gtggcctctgccagcggggccacgtccaccaccactactgcctccaaggcacagtga
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