Corvus cornix (hooded crow): 104689499
Help
Entry
104689499 CDS
T03546
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104689499 (SH3TC2)
Membrane trafficking [BR:
ccw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104689499 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
TPR_12
SNAP
SH3_1
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
104689499
NCBI-ProteinID:
XP_039415721
LinkDB
All DBs
Position
13:2129212..2149406
Genome browser
AA seq
1355 aa
AA seq
DB search
MDRLCPAAGGGGTSSVPPATSCGTSHGHLSGRENLARDPDTSAHPPCSPGEECESCWPRS
PELLPRWDQLQRRGQWWQDKNMAAGKAGVTEQSSPAPEAGHGSPDPSVVLLALRDSFPPE
ISLSFSVESRSSRCCNSQLQEAARKKLWALESDDRRVCALFKELSARLVCVQAHEDRFFL
TFKTLEEVWKFSTYLTLGYVGTCLEQLLFGQEFWLDCALVEDTELRVTVDEEHLATIYMD
LLLQEGNFFSRAAPGVWKSEQEGEEGLQLCRNELIHVKSVGQDSKWEGMSLLTGQRGVVP
VTALEPIPQPFYQWFLKNYAVSFGLSQEISGTSSQAIVKGRCIATKEHRGAAWDELSFSK
GDHIEIIGFFIPGLPWFVGKSLSTGSIGFIPTRHVSPEACEPLGKGFVFLSEEEKSPVLH
VPCNGDEQRFATLLGDLACTDITSVYRLDGFEPTAMFPKVPPEAALRGSKEIQVLQPWEE
INDWATSSTSELSSPGSEAAPATLEDVLLEKLDDLDYPKFFIDLNAGHMEDADVFDPILT
FLNQDNFVPSFQSFYDLSFSFLHSTFYGFSDEDELVLYLETSRNWAKRTRSVWAHVRLCF
LLGKLCIKKVKFSQARVYFEEAMSVLDRGFGDLPLLAALHVSLASIYLKQNMKHKFSCLL
GKTVTLLVCLPGRSFSSENELELLTYILRESIAVGNAPLEARICFLIVKLFLQLGRTEEV
LPFLEHLQCLSTTCAGPLDATATLCHLYDKKCLPNIALASARSFVPSGTRGTPTPIWRAG
FILQNASKLLGKQLDRSSIPALACLYLKQALQFCCEGRAVPSQRTLCAVLSRMYLQHGAL
DGAVCYAARAAALGRLMGEEEAFETSLSLGWMYLLQQQPGPAGAILRQLLRSLRGTDSET
QGGAVHNLLAMALRGEGHIQEAAENFLWALHKATETGNRRNQAVSLANLGQLSLSCGATQ
LAELYLLWSVRLYAELQGHQQLDVELAQVLLWLAQAMVDRQRMEDAKLCYELALGFALKW
QNLRSQLHATECLCHFYSKVCPDLQACITYHEHWASLARQLQDRELEGNARQALSQLYQA
LGTPEALRQSLDCTKQSLRIFIDLEEAMKAAEAWLQAGKLYYLLQEDELVEMYFQAAIQT
ALKWDNFSLAMDLYEKAGDTFFNGSRKRHRAVEFYRGGAVPLARKLKATQTELRLFNKLA
ELQIGLQGYEKALEFATLAARLSLRVGDQLQELVAFHRLAAAYDLLHMYEMAEDCYLKTL
AMRPPVLQSSAEALYYCKVYWHLGNLALHKLKDEQDAASYFLLALAAAAELGDQELQALL
RAKLGAIPGAPGGPEGTPGCATDRPRWLSEGGHVV
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggacaggctctgtcctgctgctggcggaggtggcacgagcagtgtcccacctgccacc
tcctgtggcacatcccacggacacctctcgggcagggagaatcttgccagggatccggac
acctctgcccaccctccgtgttccccaggtgaggagtgtgagtcctgctggccccgctcc
cctgagctcctgccccgctgggaccaactgcagcgccggggacaatggtggcaggacaag
aacatggcagcaggtaaggctggggtgacagagcagagcagccccgctcccgaggcagga
cacggctccccggacccctccgtggtgctgctggctctcagggacagctttccaccagag
atctcgctctccttctctgtcgagagccgctcctcccgatgctgcaattcccagctccag
gaagctgccaggaagaagctgtgggctctggagagtgatgatagacgtgtctgtgccctg
ttcaaggagctgtcagccaggctggtctgtgtgcaggcacatgaggatcgcttcttcctc
accttcaaaaccctggaggaagtctggaaattttccacgtatctgactttagggtatgtg
gggacctgcctggagcagctcctctttggccaggagttctggctggactgtgccctggtg
gaggacacagagctcagggtcaccgtggatgaagagcacctggccaccatctacatggat
ctgctcctccaggaagggaactttttctccagggcagcgcctggagtctggaagtcggag
caggagggtgaggagggcctgcagctctgcaggaacgagctgatccatgtgaagagtgtt
ggacaggattccaagtgggaagggatgtccctgctgactgggcagcgaggcgtggtgcct
gtgacagctctggagccgataccacagcccttttaccagtggttcctgaagaattatgct
gtgagttttggcctctcccaggagatcagcgggacgagctcgcaggccattgtcaaaggc
aggtgcattgccaccaaggagcacagaggagcagcatgggatgagctgagcttctccaaa
ggagaccacatagaaattattggcttcttcatcccgggactcccctggtttgtgggcaaa
tccctcagcaccgggagcatcggcttcattcccacccgacacgtcagtcccgaggcttgc
gaacctctgggaaagggcttcgtgtttctgagcgaagaggagaagtccccggtcctgcac
gtgccctgcaatggtgacgagcagcgctttgccaccctcctgggggacctggcatgcact
gacatcacctctgtgtaccggctggatggttttgaacccacagccatgttcccaaaagtg
ccaccagaggctgctctccgtggcagtaaagaaatccaagtgctccagccttgggaggaa
atcaatgactgggctacaagcagcacctcggagctgtccagcccaggcagtgaagccgcc
cctgccacactggaagatgttctcctggagaagctggacgacctggattatcccaaattc
ttcattgacctcaatgctgggcacatggaggatgctgatgtctttgaccccatattgacc
ttcctaaaccaagacaattttgtgcccagttttcagagcttttatgacctcagcttttcc
tttctccactccactttttatggtttctctgatgaggatgaactggtcctgtaccttgaa
acgtcccggaactgggccaagaggactcgttcagtttgggctcacgtcaggctctgtttc
ctcttgggtaagctctgcatcaaaaaggtcaagttctcccaggctcgggtgtactttgag
gaagccatgagtgtcctggacaggggctttggggacctgcccctgctggcagcgctgcac
gtgagcctggcctccatctacctgaagcagaacatgaagcacaagttctcctgcctgctg
gggaagacggtgaccttgctcgtgtgcctgcctggccgctccttcagctcagagaacgag
ctggagctcctgacgtacatcctgagggaatccatcgctgtgggcaacgctcccctggag
gcccggatctgcttcctcattgtcaagctcttccttcagctgggcaggaccgaggaggtg
ctgccctttctggagcatctccagtgtctcagcaccacctgtgctggcccactggatgcc
actgccaccctgtgccacctctacgacaagaagtgcctgccaaacatcgcgctggcctcc
gccaggtcctttgtccccagcggcaccagggggacaccgacgcccatctggagagctggc
ttcatcctccaaaacgcttccaaactcctggggaagcagctggacaggagcagcatccca
gcactggcttgtttgtacctcaagcaagcgctgcagttctgctgcgagggcagagccgtg
cccagccagaggacgctctgcgccgtcctgtccaggatgtacctgcagcatggggcgctg
gatggggcagtttgttacgcagccagggctgcagccctgggcaggttgatgggggaggag
gaggcttttgagacctcgctgtctctggggtggatgtacctcctgcagcagcagccgggc
ccagccggggccatcctgcggcagctgctgcggtcactgcgtggcacggacagcgagacc
cagggcggggccgtgcacaacctcctggccatggccctcaggggcgaagggcacattcag
gaggctgcagagaatttcctgtgggccctgcacaaggccacggagacggggaacaggagg
aatcaggccgtgtccctggctaacctgggccagctgagcctctcgtgtggtgccactcag
ctggccgagctctacctgctgtggtcagtccggctctacgccgagctccagggacaccaa
cagctggacgtggagctggcacaggtgctgctgtggctggcacaggccatggtggacagg
cagaggatggaagacgccaaactctgctatgaactggcgctggggtttgccctgaagtgg
cagaacctgaggagtcagctgcacgccactgagtgtctgtgccatttctacagcaaagtg
tgccccgacctgcaggcctgcatcacctaccacgagcactgggcgtccttggcacggcag
ctgcaggacagggagctggagggcaatgccaggcaggccctcagccagctctaccaggct
ttgggcacacctgaggctctgagacaatccctggactgcaccaagcagagcctgaggatc
ttcatcgacctcgaggaggctatgaaggcagcagaggcctggctgcaggcaggaaaactc
tattatcttctacaggaggacgagctggtggaaatgtacttccaggcagccatccagact
gctctgaaatgggacaacttctccttggccatggatctttacgagaaagcaggtgacacc
ttctttaatggcagcaggaagaggcaccgagcagtggagttctacaggggaggtgctgtg
cccttggccaggaaactcaaggccacccagacagagctgaggctgttcaataaactggca
gagctgcagattggcctgcagggctatgagaaggctctggagtttgccacgctggcagcc
aggctcagcctcagggtcggggatcagctgcaggagctggttgccttccaccgcctggcc
gcagcctatgacctgctgcacatgtatgagatggccgaggattgctacctgaagaccctg
gccatgcgtccccctgtgctgcagagctcagcagaggccctgtactactgcaaggtctac
tggcacctgggcaacctggccctgcacaagctgaaggatgaacaggatgcagcctcctac
ttcctgctggccctcgccgcagccgccgagctgggagaccaggagctgcaagccctgctc
cgtgccaagctgggtgccatccccggagccccagggggacctgagggcacgccaggctgt
gccacggaccggccccggtggctgagcgaaggtggccacgtggtgtga
DBGET
integrated database retrieval system
