Corvus cornix (hooded crow): 104689663
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Entry
104689663 CDS
T03546
Symbol
PDLIM7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104689663 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104689663 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
104689663 (PDLIM7)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
104689663
NCBI-ProteinID:
XP_039415806
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Position
13:complement(3693487..3710321)
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AA seq
883 aa
AA seq
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MGDMESYKVMLNGPAPWGFRLQGGKDFSMPLSISRLTPGGKAAQAGVGVGDWVLYIDGES
TSAMTHIEAQNRIRACGDRLCLTLSRAQNQLGKPQKVLSLDKQPLQLLESPSTPVCDPVK
LRMLEDIDDSKPHSWTSQSRSFRKLSRLVGTNSMEDGEDELVKKPSHSREALCPVAVSSL
PLQELSCWWSCRAHSALTPQWAPPALSHWSGHHLGRVLPGRPPARQDVLCRVGPAGHCWH
QAGEAKLCHCFLRKRDLEKAGALRTPCWGYWEVLGSNWTMCREPGMGLRDGRAEQGECCQ
LLLVLECICEGWAEPWSNTECCATIFSNITGMPVGPAGAQWSSVEDGEDEIVKKPRDARG
SNWGTGQQRQPPQLLEPPSDTVCDPVKLRMLEDIDDSKPHTWTSQSRSFRKLARLVGANS
MDDGEDEPVTKPRLELFPELHNRHCQRSATALTITSGGSCPKNPPGDSHGSSWGTVEQRQ
PLESPSTPGCDPGKLRMLEDAEGWQPRTGTSQSRSFRKLAQLTGTDGMEDGEDETVKKPR
DARGSSWGTVEQRQPPQPLEPPSTPGCNPGKLRLIEDAEDWQPRTGTSQSRTFRKLAQLT
GTDSSMEDHDDVFVRKPSQVSVPDPSPGATMKTEPGLAPRTPSATPGPTSRPPWAVDPSF
AERYAPDKTSTVVSKHSQPATPTPMQNRSSIVQAAQQAPEGPGRTPLCYKCNKVIRGRYL
VALGHYYHPEEFTCCQCRKVLDEGGFFEEKGSIFCPKCYDTRYAPSCAKCKKKITGEVMH
ALKMTWHVQCFTCNACKTPIRNRAFYMEEGQPYCERDYEKMFGTKCRGCDFKIDAGDRFL
EALGFSWHDTCFVCAICQTNLEGKTFYSKKDKPLCKSHAFSHV
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatggagtcctacaaggtgatgctgaatgggccggcaccctggggcttcagg
ctgcagggagggaaggatttcagcatgccgctctccatctccaggctgactccaggcggg
aaggcggcccaggccggcgtgggagtgggtgactgggtgctgtacatcgacggggagagc
accagtgccatgacacacatcgaggcccagaacaggatccgtgcctgtggggacaggctc
tgcctcaccctgagcagagcccagaaccagctggggaagccgcagaaggtgctgagcctt
gacaagcagcccctgcagctgctggagtcccccagcacccctgtgtgtgaccctgtgaag
ctgcggatgttagaggacattgacgactcaaagccccacagctggacctcgcagtcccgc
tccttccgcaaactgtcccggctggtgggcacgaacagcatggaggatggtgaggacgag
cttgttaaaaagcccagtcactcaagggaagctctttgccctgttgctgtttcttctctc
cctcttcaagagttgagctgttggtggagctgcagagctcactctgcgctcaccccacag
tgggcaccaccagcgctcagccactggtctggccatcaccttgggagggtcctgcccgga
cgcccaccggccagacaagatgtcctgtgccgggtaggacctgctgggcactgctggcac
caagctggggaggccaagctctgccattgcttcttgaggaaaagggatctggagaaggct
ggtgcactgagaacaccttgctgggggtattgggaggtgctaggcagcaactggacaatg
tgccgtgagcctggcatggggctgcgggatggcagggcagagcagggtgagtgttgccaa
cttcttctagttctggagtgcatttgtgagggatgggctgagccatggtcaaatactgag
tgctgtgctaccattttttccaatatcacagggatgcccgtgggtccagctggggcacag
tggagcagtgtggaggatggtgaggatgagattgttaaaaagcccagggatgcccgcggg
tccaactggggcacggggcaacagcggcagcccccgcagctgctggagccccccagtgac
actgtgtgtgaccctgtgaagctgcggatgttagaggacattgatgactcaaagccccac
acctggacgtcccagtcccgttccttccgcaaactggcccggctggtgggcgcaaacagc
atggacgatggtgaggatgagcctgttacaaagcccagactcgagctgtttccagagctg
cacaacaggcactgccagcgctcagccactgctctgaccatcacctcaggagggtcctgc
cccaagaacccacctggagattcccatgggtccagctggggcacagtggagcagcggcag
cctctggagtcccccagcacccccgggtgtgatcctgggaagttgcggatgttagaggat
gctgagggctggcagccccgcaccgggacctcccagtcccgctccttccgcaaactggcc
cagctgacgggcacagatggcatggaggatggtgaggatgagactgttaaaaagcccagg
gatgccagggggtccagctggggcacggtggagcagcgacagcccccacagccactggag
ccccccagcacccctgggtgcaaccccgggaagctgcgactgatagaggacgctgaggac
tggcagccccgcaccgggacctcgcagtcccgcaccttccgcaaactggcccagctgacg
ggcacagacagcagcatggaggatcatgatgatgtgtttgttaggaagcccagccaggtc
tccgtgccggacccgtccccaggagcaacgatgaagactgagccaggactggcccccagg
acccccagtgccacccctggccccaccagccgcccaccctgggctgtggacccctcgttt
gccgagcgctacgccccggacaagacgagcacggtggtgagcaagcacagccagccggcc
acgcccacccccatgcagaaccgcagctccatcgtgcaggcggcccagcaagcccccgag
gggcctggccgcacccccctctgctacaagtgcaacaaggtcatcaggggacggtacctg
gtggcgctgggacattattaccaccccgaggagttcacctgctgccagtgcaggaaggtg
ctggatgagggcggcttctttgaggagaaaggctccatcttctgccccaagtgctacgac
acgcgctacgcgcccagctgcgccaagtgcaagaagaagatcactggggaggtgatgcac
gcactgaagatgacctggcacgtgcagtgcttcacctgcaacgcctgcaaaactcccatc
cgcaaccgagccttctacatggaggagggacagccctactgtgagagagactatgagaag
atgtttggcaccaagtgccgtggctgtgacttcaagatcgatgctggagaccggttcctg
gaggcgctggggttcagctggcatgacacttgctttgtctgtgcgatctgccagaccaac
ctggaagggaagacgttctactccaagaaggacaagccgctctgcaagagccacgctttc
tcccacgtgtga
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